RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 SHPKQ9UHJ6 478 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 PRELID3BQ9Y3B1 194 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 DNAH7Q8WXX0 4024 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 TEX50A0A1B0GTY4 177 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 IGLC7A0M8Q6 106 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NCBP2LA6PVI3 153 aaKnown RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 H3BP45 60 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 BOLA2-SMG1P6H3BVE0 249 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 K7EPK0 472 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR2A4O95047 310 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 HLA-GP17693 338 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 VDAC1P21796 283 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MC5RP33032 325 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 KIR2DS2P43631 304 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 VDAC2P45880 294 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NKX2-5P52952 324 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 WT1-ASQ06250 92 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 TNXAQ16473 311 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 AARDQ4LEZ3 155 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SERTAD4-AS1Q5TG53 156 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR1S1Q8NH92 325 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 COQ8AQ8NI60 647 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 GRPEL2Q8TAA5 225 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 IL22RA2Q969J5 263 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 RRNAD1Q96FB5 475 aaKnown RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF414Q96IQ9 312 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR2A7Q96R45 310 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR4C12Q96R67 309 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 PHB2Q99623 299 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 RNF126Q9BV68 326 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF436Q9C0F3 470 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MED28Q9H204 178 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 RBKSQ9H477 322 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM14BQ9NUH8 114 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 BET1LQ9NYM9 111 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MRPL36Q9P0J6 103 aaKnown RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 GSKIPQ9P0R6 139 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ZMAT5Q9UDW3 170 aaKnown RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 KCNIP3Q9Y2W7 256 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MOB4Q9Y3A3 225 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 WSB1Q9Y6I7 421 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 S4R3C0 116 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 HUWE1Q7Z6Z7 4374 aaKnown RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 LYSTQ99698 3801 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV3-21A0A0B4J1V1 117 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 IGSF23A1L1A6 192 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 C5orf51A6NDU8 294 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 C15orf62A8K5M9 175 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV3-48P01763 117 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 HLA-DRB1P01911 266 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 FAM106CPP0CH98 169 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 RRASP10301 218 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 ANXA3P12429 323 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 BRS3P32247 399 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 SMCO1Q147U7 214 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 FXYD3Q14802 87 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 C9orf152Q5JTZ5 239 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 H2BFWTQ7Z2G1 175 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 PPP1R27Q86WC6 154 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 OR5AU1Q8NGC0 362 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 PPP1R1CQ8WVI7 109 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 SRSF12Q8WXF0 261 aaKnown RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 LSM10Q969L4 123 aaKnown RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 C2orf50Q96LR7 162 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 MCRIP2Q9BUT9 160 aaKnown RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 HINT2Q9BX68 163 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 GPN1Q9HCN4 374 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 PARP11Q9NR21 331 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 NDUFA4L2Q9NRX3 87 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 FAM212BQ9NTI7 297 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 KIAA1456Q9P272 454 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 MBD2Q9UBB5 411 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 HSPB7Q9UBY9 170 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 FOXA2Q9Y261 457 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 TMED3Q9Y3Q3 217 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 LSM5Q9Y4Y9 91 aaKnown RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 OR51B2Q9Y5P1 312 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 TSSC4Q9Y5U2 329 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-204ENST00000463622 RFNGQ9Y644 331 aa2.75□□□□□ -1.97
SCFD1-204ENST00000463622 TNCP24821 2201 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TCRBV4S1A1TA0A5B7 111 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 FAM24AA6NFZ4 105 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PMS2P5A8MQ11 134 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 WRBO00258 174 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 FGF16O43320 207 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 SSSCA1O60232 199 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 HRASP01112 189 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 APOHP02749 345 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RNASE2P10153 161 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 S100GP29377 79 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RPL27AP46776 148 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 LGALS7P47929 136 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 S100A10P60903 97 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 ERVK-16P61578 105 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 RPL8P62917 257 aaKnown RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PRCDQ00LT1 54 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TNFRSF9Q07011 255 aa2.74□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM267Q0VDI3 215 aaPredicted RBP2.74□□□□□ -1.97
SCFD1-204ENST00000463622 PLGLAQ15195 96 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms