RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 LHFPL1Q86WI0 220 aa14.82□□□□□ -0.04
CPSF7-209ENST00000463244 OR1S2Q8NGQ3 325 aa14.82□□□□□ -0.04
CPSF7-209ENST00000463244 NEU1Q99519 415 aa14.82□□□□□ -0.04
CPSF7-209ENST00000463244 KRTAP4-5Q9BYR2 181 aa14.82□□□□□ -0.04
CPSF7-209ENST00000463244 NRN1Q9NPD7 142 aa14.82□□□□□ -0.04
CPSF7-209ENST00000463244 IGLV2-18A0A075B6J9 118 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 A0A0G2JRQ6 117 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 C3orf85A0A1B0GTC6 90 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 RPS10-NUDT3A0A1W2PQS6 291 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 APOA1P02647 267 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 SPART-AS1P0CW21 52 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 YPEL3P61236 119 aaPredicted RBP14.81□□□□□ -0.04
CPSF7-209ENST00000463244 PRSS54Q6PEW0 395 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 Q8WTZ3 238 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 COMMD3Q9UBI1 195 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 NACAE9PAV3 2078 aa14.81□□□□□ -0.04
CPSF7-209ENST00000463244 ZNF705FA8MVS1 300 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 IFNA21P01568 189 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 ZNF705DP0CH99 300 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 ZNF705BP0CI00 300 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 HLA-DRB4P13762 266 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 OR10J1P30954 320 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 RND2P52198 227 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 LSM3P62310 102 aaKnown RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 DHODHQ02127 395 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 USF2Q15853 346 aaPredicted RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 TRIM16LQ309B1 348 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 Q6ZRM9 215 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 ZNF575Q86XF7 245 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 UBE2DNLQ8IWF7 75 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 RRNAD1Q96FB5 475 aaKnown RBP14.8□□□□□ -0.04
CPSF7-209ENST00000463244 FAM210BQ96KR6 192 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 HLA-DRB4X5D2U9 266 aa14.8□□□□□ -0.04
CPSF7-209ENST00000463244 TMEM189A5PLL7 270 aa14.79□□□□□ -0.04
CPSF7-209ENST00000463244 HTR2BP41595 481 aa14.79□□□□□ -0.04
CPSF7-209ENST00000463244 SPCS3P61009 180 aa14.79□□□□□ -0.04
CPSF7-209ENST00000463244 SP6Q3SY56 376 aa14.79□□□□□ -0.04
CPSF7-209ENST00000463244 AARDQ4LEZ3 155 aa14.79□□□□□ -0.04
CPSF7-209ENST00000463244 SMIM9A6NGZ8 99 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 BUB3O43684 328 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 IL4P05112 153 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 SLC25A4P12235 298 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 UCP1P25874 307 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 EMP1P54849 157 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 SIGLEC15Q6ZMC9 328 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 ARRDC1Q8N5I2 433 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 OR52E5Q8NH55 327 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 YIPF6Q96EC8 236 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 COPZ2Q9P299 210 aa14.78□□□□□ -0.04
CPSF7-209ENST00000463244 ATP6V1G2O95670 118 aa14.77□□□□□ -0.05
CPSF7-209ENST00000463244 NKX2-1P43699 371 aaPredicted RBP14.77□□□□□ -0.05
CPSF7-209ENST00000463244 C2orf83Q53S99 150 aa14.77□□□□□ -0.05
CPSF7-209ENST00000463244 RNASE10Q5GAN6 216 aaKnown RBP14.77□□□□□ -0.05
CPSF7-209ENST00000463244 SOHLH1Q5JUK2 328 aa14.77□□□□□ -0.05
CPSF7-209ENST00000463244 RNASE11Q8TAA1 199 aaKnown RBP14.77□□□□□ -0.05
CPSF7-209ENST00000463244 RNASEH2CQ8TDP1 164 aaKnown RBP14.77□□□□□ -0.05
CPSF7-209ENST00000463244 DKK2Q9UBU2 259 aa14.77□□□□□ -0.05
CPSF7-209ENST00000463244 GSTZ1O43708 216 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-209ENST00000463244 ELK1P19419 428 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 RNF212Q495C1 297 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 GDF5OSQ5U4N7 250 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 CCDC71LQ8N9Z2 235 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 HEYLQ9NQ87 328 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-209ENST00000463244 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.76□□□□□ -0.05
CPSF7-209ENST00000463244 KLK11Q9UBX7 282 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 RFNGQ9Y644 331 aa14.76□□□□□ -0.05
CPSF7-209ENST00000463244 TEX48A0A1B0GUV7 120 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 CD3DP04234 171 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 FAM219AQ8IW50 185 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 ZFAND1Q8TCF1 268 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 TMEM170AQ8WVE7 144 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 NIPSNAP3BQ9BS92 247 aa14.75□□□□□ -0.05
CPSF7-209ENST00000463244 IGHV3OR16-12A0A075B7B8 117 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 HPGDSO60760 199 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 B3GALNT1O75752 331 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 NXPH3O95157 252 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 TOMM40O96008 361 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 RD3LP0DJH9 198 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 DEFB1P60022 68 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 RNASE12Q5GAN4 147 aaKnown RBP14.74□□□□□ -0.05
CPSF7-209ENST00000463244 FAM222AQ5U5X8 452 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 SLC24A4Q8NFF2 622 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 OR13C8Q8NGS7 320 aa14.74□□□□□ -0.05
CPSF7-209ENST00000463244 APOBP04114 4563 aaKnown RBP14.74□□□□□ -0.05
CPSF7-209ENST00000463244 CDS2O95674 445 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 IGKV3-20P01619 116 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 TBPP20226 339 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 FXYD7P58549 80 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 OXA1LQ15070 435 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 C1orf134Q5TEV5 83 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 ETFRF1Q6IPR1 90 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 ZNF709Q8N972 641 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 OR4D10Q8NGI6 311 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 TERB2Q8NHR7 220 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 NPIPB3Q92617 1050 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 TMEM222Q9H0R3 208 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 SAV1Q9H4B6 383 aaPredicted RBP14.73□□□□□ -0.05
CPSF7-209ENST00000463244 DNAH5Q8TE73 4624 aa14.73□□□□□ -0.05
CPSF7-209ENST00000463244 FOXI2Q6ZQN5 318 aa14.72□□□□□ -0.05
CPSF7-209ENST00000463244 OR52I2Q8NH67 350 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms