RNA–Protein interactions for RNA: ENST00000461869.5

SF3A3-203, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-203ENST00000461869 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 WDR61Q9GZS3 305 aaKnown RBP12.03□□□□□ -0.48
SF3A3-203ENST00000461869 NPVFQ9HCQ7 196 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 KCNIP2Q9NS61 270 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 THYN1Q9P016 225 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 LINC00527Q9UJ94 153 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 ZNF580Q9UK33 172 aa12.03□□□□□ -0.48
SF3A3-203ENST00000461869 LSM4Q9Y4Z0 139 aaKnown RBP12.03□□□□□ -0.48
SF3A3-203ENST00000461869 C17orf112F2Z3M2 114 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 IGF1P05019 195 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 SPP1P10451 314 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 HIST1H1BP16401 226 aaKnown RBP12.02□□□□□ -0.49
SF3A3-203ENST00000461869 FGF7P21781 194 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 RAB14P61106 215 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 SLC35B1P78383 322 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 AKR1C1Q04828 323 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 RAB31Q13636 194 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 UNQ5815/PRO19632Q6UWF5 114 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 COMMD1Q8N668 190 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 ZNF709Q8N972 641 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 LRRC20Q8TCA0 184 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 TMED6Q8WW62 240 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 MISP3Q96FF7 219 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 ASCL2Q99929 193 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 PSMG3Q9BT73 122 aaPredicted RBP12.02□□□□□ -0.49
SF3A3-203ENST00000461869 WDR83OSQ9Y284 106 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 FBXO7Q9Y3I1 522 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 TIMM9Q9Y5J7 89 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 TENM3Q9P273 2699 aa12.02□□□□□ -0.49
SF3A3-203ENST00000461869 CCL24O00175 119 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 AP4M1O00189 453 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 EGR2P11161 476 aaPredicted RBP12.01□□□□□ -0.49
SF3A3-203ENST00000461869 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 ECSCRQ19T08 205 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 ASPHD1Q5U4P2 390 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 RAX2Q96IS3 184 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 PRR25Q96S07 402 aa12.01□□□□□ -0.49
SF3A3-203ENST00000461869 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 RAB5CP51148 216 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 TEPPQ6URK8 271 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 BTNL8Q6UX41 500 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 RNF141Q8WVD5 230 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 SLC25A32Q9H2D1 315 aa12□□□□□ -0.49
SF3A3-203ENST00000461869 IGLV11-55A0A075B6I3 123 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 UMAD1C9J7I0 102 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 SERF2P84101 59 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 C9orf66Q5T8R8 295 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 OR2G3Q8NGZ4 309 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 NPCDR1Q9BY65 106 aa11.99□□□□□ -0.49
SF3A3-203ENST00000461869 H3BUA1 57 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 SCGB2A1O75556 95 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 MT-CO2P00403 227 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 SULT1A2P50226 295 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 MFAP2P55001 183 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 RUNX1Q01196 453 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 GAMTQ14353 236 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 KLK9Q2XQG4 91 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 TEX38Q6PEX7 206 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 SH3BGRL3Q9H299 93 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 FNDC4Q9H6D8 234 aaPredicted RBP11.98□□□□□ -0.49
SF3A3-203ENST00000461869 KLK9Q9UKQ9 250 aa11.98□□□□□ -0.49
SF3A3-203ENST00000461869 LINC01548A6NM66 108 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 BRI3O95415 125 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 MBP02144 154 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 RPLP1P05386 114 aaKnown RBP11.97□□□□□ -0.49
SF3A3-203ENST00000461869 CAMLGP49069 296 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 DEFB136Q30KP8 78 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 C19orf54Q5BKX5 351 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 CLLU1Q5K131 121 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 AKR1C8PQ5T2L2 129 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 DPPA3Q6W0C5 159 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 C19orf35Q6ZS72 473 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 TMEM116Q8NCL8 245 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 OR5T1Q8NG75 326 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 ACY3Q96HD9 319 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 RSG1Q9BU20 258 aa11.97□□□□□ -0.49
SF3A3-203ENST00000461869 SEC14L6B5MCN3 397 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 I3L2K1 104 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 FAM74A1Q5RGS3 127 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 CASC10Q5T4H9 136 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 ACSM6Q6P461 480 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 TMEM182Q6ZP80 229 aaPredicted RBP11.96□□□□□ -0.49
SF3A3-203ENST00000461869 THAP8Q8NA92 274 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 MUC7Q8TAX7 377 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 FANCD2OSQ96PS1 177 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 GGTLC1Q9BX51 225 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 DMRT1Q9Y5R6 373 aa11.96□□□□□ -0.49
SF3A3-203ENST00000461869 G3V318 75 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 K7EIM0 57 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 AGPAT2O15120 278 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 PRH1P02810 166 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 FABP1P07148 127 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 NPBWR1P48145 328 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 RND2P52198 227 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 SELENOTP62341 195 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 BLOC1S1P78537 153 aa11.95□□□□□ -0.5
SF3A3-203ENST00000461869 NECAP1Q8NC96 275 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms