RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 IGKV1-5P01602 117 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 IGLC1P0CG04 106 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 NAT1P18440 290 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 OPRK1P41145 380 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 DAD1P61803 113 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 BSXQ3C1V8 233 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 SLC35B3Q9H1N7 401 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 IFT46Q9NQC8 304 aa12.03□□□□□ -0.48
UBE2D4-209ENST00000454428 BUB3O43684 328 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 MXD1Q05195 221 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 LYSMD2Q8IV50 215 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 NRG4Q8WWG1 115 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 CLUHP3Q96NS8 147 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 SAV1Q9H4B6 383 aaPredicted RBP12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 LINC00588Q9Y4M8 146 aa12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 SRRM2Q9UQ35 2752 aaKnown RBP12.02□□□□□ -0.49
UBE2D4-209ENST00000454428 ETV6P41212 452 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 DHODHQ02127 395 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 ZNF79Q15937 498 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 IDNKQ5T6J7 187 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 SIGLEC15Q6ZMC9 328 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 SLC35G3Q8N808 338 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 OR5H2Q8NGV7 314 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 OR6F1Q8NGZ6 308 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 DIABLOQ9NR28 239 aa12.01□□□□□ -0.49
UBE2D4-209ENST00000454428 HMCN2Q8NDA2 5059 aa12□□□□□ -0.49
UBE2D4-209ENST00000454428 TRAV30A0A087WSZ9 112 aa12□□□□□ -0.49
UBE2D4-209ENST00000454428 HBE1P02100 147 aa12□□□□□ -0.49
UBE2D4-209ENST00000454428 GSG1LQ6UXU4 331 aa12□□□□□ -0.49
UBE2D4-209ENST00000454428 OR1S2Q8NGQ3 325 aa12□□□□□ -0.49
UBE2D4-209ENST00000454428 WDR12Q9GZL7 423 aaKnown RBP12□□□□□ -0.49
UBE2D4-209ENST00000454428 PRM2P04554 102 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 HRH1P35367 487 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 ALDH3B2P48448 385 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 HOXA1P49639 335 aaPredicted RBP11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 SUB1P53999 127 aaKnown RBP eCLIP11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 TAS2R46P59540 309 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 YPEL3P61236 119 aaPredicted RBP11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 PRSS54Q6PEW0 395 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 FOXI2Q6ZQN5 318 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 Q8WTZ3 238 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 GOLT1BQ9Y3E0 138 aa11.99□□□□□ -0.49
UBE2D4-209ENST00000454428 SOCS3O14543 225 aa11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 NXPH3O95157 252 aa11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 IL4P05112 153 aa11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 XGP55808 180 aa11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 RRN3P1Q2M238 152 aa11.98□□□□□ -0.49
UBE2D4-209ENST00000454428 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 RPS10-NUDT3A0A1W2PQS6 291 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 F6UB75 175 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 SCGB2A1O75556 95 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 NUDT3O95989 172 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 OR10J1P30954 320 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 RND2P52198 227 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 TAS2R20P59543 309 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 PSG9Q00887 426 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 LYPD1Q8N2G4 141 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 OR4B1Q8NGF8 309 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 LINC00052Q96N35 136 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 SSR3Q9UNL2 185 aa11.97□□□□□ -0.49
UBE2D4-209ENST00000454428 A0A0G2JRQ6 117 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 EBAG9O00559 213 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 HLA-DMAP28067 261 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 RORCP51449 518 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 CCL18P55774 89 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 LPCAT3Q6P1A2 487 aa11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 C7orf50Q9BRJ6 194 aaKnown RBP11.96□□□□□ -0.49
UBE2D4-209ENST00000454428 PSMB9P28065 219 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 S100GP29377 79 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 HSPA13P48723 471 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 PAX9P55771 341 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 UCP3P55916 312 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 Q5VSD8 79 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 SSX7Q7RTT5 188 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 RNF141Q8WVD5 230 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 TMEM170AQ8WVE7 144 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 TP53RKQ96S44 253 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 Q9H8V8 135 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 SCPEP1Q9HB40 452 aa11.95□□□□□ -0.5
UBE2D4-209ENST00000454428 PLAC8L1A1L4L8 177 aa11.94□□□□□ -0.5
UBE2D4-209ENST00000454428 TOMM40O96008 361 aa11.94□□□□□ -0.5
UBE2D4-209ENST00000454428 PSMB3P49720 205 aa11.94□□□□□ -0.5
UBE2D4-209ENST00000454428 AMTNQ6UX39 209 aa11.94□□□□□ -0.5
UBE2D4-209ENST00000454428 KLK11Q9UBX7 282 aa11.94□□□□□ -0.5
UBE2D4-209ENST00000454428 A0A0J9YX75 114 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 LYRM9A8MSI8 78 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 A8MTW9 85 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 F5H768 121 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 GSTZ1O43708 216 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 DEFB130BP0DP73 79 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 DEFB130AP0DP74 79 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 ELK1P19419 428 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 FUSP35637 526 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 AKR1C2P52895 323 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 FCN2Q15485 313 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 AARDQ4LEZ3 155 aa11.93□□□□□ -0.5
UBE2D4-209ENST00000454428 SPARTQ8N0X7 666 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms