RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 SP6Q3SY56 376 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 COA6Q5JTJ3 125 aaKnown RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 C10orf91Q5T1B1 145 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR2T2Q6IF00 324 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF880Q6PDB4 577 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF818PQ6ZRF7 136 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 LYZL2Q7Z4W2 148 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 C1orf174Q8IYL3 243 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SELENOHQ8IZQ5 122 aaKnown RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 GAPTQ8N292 157 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 C17orf78Q8N4C9 275 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 HSD17B11Q8NBQ5 300 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR8G5Q8NG78 346 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR11L1Q8NGX0 322 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 MRPL30Q8TCC3 161 aaKnown RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 GLYATL2Q8WU03 294 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 GNPNAT1Q96EK6 184 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 WFIKKN1Q96NZ8 548 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TP53RKQ96S44 253 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 GINS3Q9BRX5 216 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 LCE3DQ9BYE3 92 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SMIM3Q9BZL3 60 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 BCL2L14Q9BZR8 327 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 ARV1Q9H2C2 271 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR51B6Q9H340 312 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SMDT1Q9H4I9 107 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 PLEKHF2Q9H8W4 249 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TUBG2Q9NRH3 451 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 C19orf12Q9NSK7 152 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 LYRM2Q9NU23 88 aaPredicted RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 UQCC1Q9NVA1 299 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 MTCH1Q9NZJ7 389 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 TAAR3PQ9P1P4 343 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 RBM7Q9Y580 266 aaKnown RBP2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 GPR179Q6PRD1 2367 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 SPEGQ15772 3267 aa2.67□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF407Q9C0G0 2248 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 PPIAL4EA0A075B759 164 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 TMEM30CPA0ZSE6 113 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 IQCF6A8MYZ5 107 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 RNASEK-C17orf49H0YIS7 233 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 DNASE2O00115 360 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SIRPB1O00241 398 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 TOR1AO14656 332 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 NUPL2O15504 423 aaKnown RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 LYZL6O75951 148 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 HAND1O96004 215 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 IFNA5P01569 189 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CD5P06127 495 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SCTP09683 121 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 PGA5P0DJD9 388 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 PPIAL4FP0DN26 164 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 MUC1P15941 1255 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CBR1P16152 277 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF14P17017 642 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CTRB1P17538 263 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 ADCYAP1P18509 176 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 F2RP25116 425 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SNCAP37840 140 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 LPAR6P43657 344 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 IDH3GP51553 393 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 DYNLT3P51808 116 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 POLR2GP62487 172 aaKnown RBP eCLIP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 HBG1P69891 147 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 HBG2P69892 147 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 AKR1C1Q04828 323 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CATR1Q13166 79 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CLINT1Q14677 625 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 TSC22D1Q15714 1073 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 MSMO1Q15800 293 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 GUK1Q16774 197 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SMIM21Q3B7S5 101 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 NMSQ5H8A3 153 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 AKR1C8PQ5T2L2 129 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 DPPA3Q6W0C5 159 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 Q6ZT83 130 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 ASCL5Q7RTU5 278 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 TGIF2LXQ8IUE1 241 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 H1FOOQ8IZA3 346 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CNEP1R1Q8N9A8 125 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 DEFB124Q8NES8 71 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR5C1Q8NGR4 320 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 FAM213BQ8TBF2 198 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SLC25A40Q8TBP6 338 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 LSM10Q969L4 123 aaKnown RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 ZNF488Q96MN9 340 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 ATP5SQ99766 215 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR2J1Q9GZK6 312 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 EIF5A2Q9GZV4 153 aaKnown RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 FGF23Q9GZV9 251 aaPredicted RBP2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 OR51I2Q9H344 312 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 SMCO4Q9NRQ5 59 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CACFD1Q9UGQ2 172 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 TRAPPC2LQ9UL33 140 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 PRELID1Q9Y255 219 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 PRELID3BQ9Y3B1 194 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 FAM186AA6NE01 2351 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 CACNA1GO43497 2377 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 FREM1Q5H8C1 2179 aa2.66□□□□□ -1.98
HMGB3P6-201ENST00000444896 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms