RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SYS1-DBNDD2H3BUS1 97 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 NDUFS4O43181 175 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 B3GALT2O43825 422 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 EPPINO95925 133 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 REG1AP05451 166 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 CSN3P07498 182 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 SMIM10L1P0DMW3 83 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ATP1B2P14415 290 aaPredicted RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 B4GALT1P15291 398 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 MFAP2P55001 183 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 XGP55808 180 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 NDUFV3P56181 108 aaKnown RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 CLDN17P56750 224 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 LINC00310P59036 64 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 SEC61GP60059 68 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PSG4Q00888 419 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ZNF415Q09FC8 603 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 IBA57Q5T440 356 aaKnown RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 RHBDD2Q6NTF9 364 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 EBLN2Q6P2I7 272 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ACP7Q6ZNF0 438 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PRSS41Q7RTY9 318 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ARL17AQ8IVW1 177 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 OR4X2Q8NGF9 303 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C8orf46Q8TAG6 207 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 GATAD1Q8WUU5 269 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 SMIM10Q96HG1 83 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 EDA2RQ9HAV5 297 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PSENENQ9NZ42 101 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 MCTS1Q9ULC4 181 aaKnown RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 ARHGAP21Q5T5U3 1957 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PRD5 423 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PRF3 423 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PRM7 423 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C21orf140B9A014 251 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 NAPSAO96009 420 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PRB2P02812 416 aaPredicted RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 MEOX1P50221 254 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ZNF816Q0VGE8 651 aaPredicted RBP2.32□□□□□ -2.04
LIG4-203ENST00000442234 FXYD3Q14802 87 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 GUSBP1Q15486 140 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TMEM42Q69YG0 159 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 FOXI2Q6ZQN5 318 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 C11orf44Q8N8P7 122 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 FADS6Q8N9I5 356 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 ZPLD1Q8TCW7 415 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 TIMD4Q96H15 378 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 RABAC1Q9UI14 185 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 DUSP13Q9UII6 198 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 B9D1Q9UPM9 204 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 PKIGQ9Y2B9 76 aa2.32□□□□□ -2.04
LIG4-203ENST00000442234 SHANK1Q9Y566 2161 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 NYNRINQ9P2P1 1898 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 FER1L5A0AVI2 2057 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 IGHV1OR21-1A0A087WYE8 117 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SAA2-SAA4A0A096LPE2 208 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 TRAV8-1A0A0A6YYK1 113 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PRR32B1ATL7 298 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 C9JAW5 83 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OR2J3O76001 311 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 WISP2O76076 250 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 NUDT14O95848 222 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 COX8AP10176 69 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 RPL7P18124 248 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 INSL3P51460 131 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 RPL8P62917 257 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 SLC38A11Q08AI6 406 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FOXI1Q12951 378 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 TMEM187Q14656 261 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 MFSD12Q6NUT3 480 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PPP1R27Q86WC6 154 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 BCORP1Q8N888 145 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OR8A1Q8NGG7 326 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 OR9G4Q8NGQ1 327 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SFXN3Q9BWM7 321 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PLEKHA3Q9HB20 300 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 TAC3Q9UHF0 121 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 HIGD1AQ9Y241 93 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 KLF12Q9Y4X4 402 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PLXNA3P51805 1871 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 CENPVL1A0A0U1RR11 272 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 CENPVL3A0A0U1RRI6 287 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 C3orf85A0A1B0GTC6 90 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 A0A1W2PR77 199 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FEZF1A0PJY2 475 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 F8W735 103 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 F8WDY8 70 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 ATP5LO75964 103 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 SLC25A5P05141 298 aaKnown RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 ASAH2BP0C7U1 165 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 ATP5G3P48201 142 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 FOXA3P55318 350 aaPredicted RBP2.31□□□□□ -2.04
LIG4-203ENST00000442234 IZUMO4Q1ZYL8 232 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 DMRTC1Q5HYR2 192 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 Q6AWC8 147 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 PCSK4Q6UW60 755 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 DGAT2L6Q6ZPD8 337 aa2.31□□□□□ -2.04
LIG4-203ENST00000442234 BCL6BQ8N143 479 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms