RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 ZNF626Q68DY1 528 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 HRCT1Q6UXD1 115 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 CDC20BQ86Y33 519 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF440Q8IYI8 595 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 CIARTQ8N365 385 aaPredicted RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 OR51A4Q8NGJ6 313 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 PFN4Q8NHR9 129 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNRF4Q8WWF5 429 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 GPX7Q96SL4 187 aaPredicted RBP4.43□□□□□ -1.7
RFC3-202ENST00000434425 C1QTNF6Q9BXI9 259 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 MED28Q9H204 178 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 JPT2Q9H910 190 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 TAS2R8Q9NYW2 309 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 EHFQ9NZC4 300 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF835Q9Y2P0 537 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 ZNF257Q9Y2Q1 563 aa4.43□□□□□ -1.7
RFC3-202ENST00000434425 TLN2Q9Y4G6 2542 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 IGHV1-45A0A0A0MS14 117 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 TRAV26-2A0A0B4J265 109 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 NPFFO15130 113 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 LMX1BO60663 402 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 TNFSF13O75888 250 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 ARL6IP5O75915 188 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 NDUFB2O95178 105 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 EIF4EP06730 217 aaKnown RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 IGLC1P0CG04 106 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 PGA5P0DJD9 388 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 MED14OSP0DP75 135 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 FGF6P10767 208 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 PGAM2P15259 253 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 BTCP35070 178 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 HNRNPA3P51991 378 aaKnown RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 SLC25A1P53007 311 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 RPS11P62280 158 aaKnown RBP eCLIP4.42□□□□□ -1.7
RFC3-202ENST00000434425 SLC35A1P78382 337 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 SLC38A11Q08AI6 406 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 PRDX4Q13162 271 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 INSL4Q14641 139 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 CDK5R1Q15078 307 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 RNASE12Q5GAN4 147 aaKnown RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 TSPO2Q5TGU0 170 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 CEACAM19Q7Z692 300 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 ZCCHC24Q8N2G6 241 aaKnown RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 TTC9CQ8N5M4 171 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 DEFB125Q8N687 156 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 STPG4Q8N801 248 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 OR8B12Q8NGG6 310 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 ZNF431Q8TF32 576 aaPredicted RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 MBD6Q96DN6 1003 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 FAM19A4Q96LR4 140 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 SLC25A31Q9H0C2 315 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 RPRMQ9NS64 109 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 VAX2Q9UIW0 290 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 PROCRQ9UNN8 238 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 KLF13Q9Y2Y9 288 aaPredicted RBP4.42□□□□□ -1.7
RFC3-202ENST00000434425 INSIG2Q9Y5U4 225 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 NBEAL1Q6ZS30 2694 aa4.42□□□□□ -1.7
RFC3-202ENST00000434425 IGLV3-12A0A075B6K2 115 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 TRAV5A0A0B4J249 113 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 LOC107984640A0A0U1RRK4 108 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 NAP1L6A6NFF2 107 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 J3QLW9 94 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 K7EPK0 472 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 OVOL1O14753 267 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 REM1O75628 298 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 PPP1R3DO95685 299 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 IGLC6P0CF74 106 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 INPP1P49441 399 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 UBA52P62987 128 aaKnown RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 ATRQ13535 2644 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 KLF9Q13886 244 aaPredicted RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 IQCJQ1A5X6 159 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 LRRC10Q5BKY1 277 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 TMEM255AQ5JRV8 349 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 ZNF506Q5JVG8 444 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 TMEM244Q5VVB8 128 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 AMMECR1LQ6DCA0 310 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 SPINK14Q6IE38 97 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 UFSP1Q6NVU6 142 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 CSPG4Q6UVK1 2322 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 EML6Q6ZMW3 1958 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 DNM1P46Q6ZS02 220 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 ZNF695Q8IW36 515 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 FAM71E2Q8N5Q1 922 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 PHF3Q92576 2039 aaKnown RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 CARD19Q96LW7 228 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 C19orf24Q9BVV8 132 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 GNB1LQ9BYB4 327 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 MRPL32Q9BYC8 188 aaKnown RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 PRSS22Q9GZN4 317 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 RERGLQ9H628 205 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 EXOSC3Q9NQT5 275 aaKnown RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 PARP11Q9NR21 331 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 MDFICQ9P1T7 246 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 ZNF629Q9UEG4 869 aaPredicted RBP4.41□□□□□ -1.7
RFC3-202ENST00000434425 CUBNO60494 3623 aa4.41□□□□□ -1.7
RFC3-202ENST00000434425 MXRA5Q9NR99 2828 aa4.4□□□□□ -1.7
RFC3-202ENST00000434425 STAB1Q9NY15 2570 aa4.4□□□□□ -1.71
RFC3-202ENST00000434425 TRAV27A0A087WT01 109 aa4.4□□□□□ -1.71
RFC3-202ENST00000434425 A0A0B4J2A0 478 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms