RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 MUC21A0A140T8X8 626 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 C1orf122Q6ZSJ8 110 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 GATA4P43694 442 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 OR1P1Q8NH06 330 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 DKK4Q9UBT3 224 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 SCGB1D4Q6XE38 83 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 ZNF383Q8NA42 475 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 Q8TCH9 128 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 SIGLEC9Q9Y336 463 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 COL4A3Q01955 1670 aa13.97□□□□□ -0.17
SMARCA4-203ENST00000429416 TP53BP1Q12888 1972 aaPredicted RBP13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 DUSP14O95147 198 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 CCDC168Q8NDH2 2452 aa13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 NDPQ00604 133 aa13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 PMS2P11Q13670 270 aa13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 ANKHD1Q8IWZ3 2542 aaKnown RBP13.96□□□□□ -0.17
SMARCA4-203ENST00000429416 PSMG3Q9BT73 122 aaPredicted RBP13.96□□□□□ -0.18
SMARCA4-203ENST00000429416 SYNJ2BPP57105 145 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 HERPUD1Q15011 391 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 C2orf68Q2NKX9 166 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 AP5S1Q9NUS5 200 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 GCGP01275 180 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 ZNF688P0C7X2 276 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 SIGLEC15Q6ZMC9 328 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 HIST1H2BAQ96A08 127 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 RARRES2Q99969 163 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 KLK15Q9H2R5 256 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 Q9H3A6 140 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 TRAV3A0A0B4J244 114 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 CD7P09564 240 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 TMEM97Q5BJF2 176 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 RCC1LQ96I51 464 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 NIT2Q9NQR4 276 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 HOXA3O43365 443 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 FAM3BP58499 235 aaPredicted RBP13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 RPL15P61313 204 aaKnown RBP13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 SLC50A1Q9BRV3 221 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 TNFRSF18Q9Y5U5 241 aa13.95□□□□□ -0.18
SMARCA4-203ENST00000429416 IGLV3-9A0A075B6K5 115 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 GRIFINA4D1Z8 144 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 DEFA6Q01524 100 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 IGHV4-30-2A0A087WSY4 118 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 CENPWQ5EE01 88 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 SCGB1C2P0DMR2 95 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 NAT1P18440 290 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 LOXP28300 417 aaPredicted RBP13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 USMG5Q96IX5 58 aa13.94□□□□□ -0.18
SMARCA4-203ENST00000429416 LINC00473A8K010 186 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 KLHDC1Q8N7A1 406 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 C18orf12Q96KH6 178 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 MDKP21741 143 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 Q8NA96 180 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 SDF2L1Q9HCN8 221 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 GOLGB1Q14789 3259 aaKnown RBP13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 MED13Q9UHV7 2174 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 MYLKQ15746 1914 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 SHANK1Q9Y566 2161 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 IGKV1-16P04430 117 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 FAM71F2Q6NXP2 309 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 MIEN1Q9BRT3 115 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 NUDT3O95989 172 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 UBE2DNLQ8IWF7 75 aa13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 GSX1Q9H4S2 264 aaPredicted RBP13.93□□□□□ -0.18
SMARCA4-203ENST00000429416 IGHV4-61A0A0C4DH41 118 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 ZNF324O75467 553 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 MAP1LC3CQ9BXW4 147 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 PEF1Q9UBV8 284 aaKnown RBP13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 SPSB3Q6PJ21 355 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 VAMP8Q9BV40 100 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 OVOL3O00110 214 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 VENTXO95231 258 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 AREGP15514 252 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 ZNF502Q8TBZ5 544 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 PEX7O00628 323 aa13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 SDHCQ99643 169 aaPredicted RBP13.92□□□□□ -0.18
SMARCA4-203ENST00000429416 TRBV7-1A0A0A6YYK4 115 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 PHOX2AO14813 284 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 PYYP10082 97 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 TMEM249Q2WGJ8 235 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 C19orf35Q6ZS72 473 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 BEND2Q8NDZ0 799 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 KIR2DL4Q99706 377 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 ARFGEF3Q5TH69 2177 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 CMC4P56277 68 aaPredicted RBP13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 CBLN2Q8IUK8 224 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 ATG101Q9BSB4 218 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 ATP6V0E1O15342 81 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 TDGF1P3P51864 188 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 GPR61Q9BZJ8 451 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 OR11H12B2RN74 326 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 WISP2O76076 250 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 LEPP41159 167 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 RPL29P47914 159 aaKnown RBP13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 WDR86Q86TI4 376 aa13.91□□□□□ -0.18
SMARCA4-203ENST00000429416 DANCRP0C864 163 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 PARLQ9H300 379 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 TRGV4A0A0C4DH28 118 aa13.9□□□□□ -0.18
SMARCA4-203ENST00000429416 H7C1H1 209 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms