RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 PIGPP57054 158 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 RND3P61587 244 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 TRIM16LQ309B1 348 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 FAM210BQ96KR6 192 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 Q9H521 79 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 NRN1Q9NPD7 142 aa13.07□□□□□ -0.32
UPK3BP1-201ENST00000428678 IGHV3OR16-12A0A075B7B8 117 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 HTN3P15516 51 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 OR10J1P30954 320 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 RND2P52198 227 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 DHODHQ02127 395 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 ZNF705AQ6ZN79 300 aaPredicted RBP13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 RRNAD1Q96FB5 475 aaKnown RBP13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 NEU1Q99519 415 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 SCPEP1Q9HB40 452 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 PLA2G2EQ9NZK7 142 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 NACAE9PAV3 2078 aa13.06□□□□□ -0.32
UPK3BP1-201ENST00000428678 SMIM31A0A1B0GVY4 71 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 ZNF705FA8MVS1 300 aaPredicted RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 IGKV3-20P01619 116 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 IL4P05112 153 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 ZNF705DP0CH99 300 aaPredicted RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 ZNF705BP0CI00 300 aaPredicted RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 HLA-DRB4P13762 266 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 FXYD7P58549 80 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 USF2Q15853 346 aaPredicted RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 BSXQ3C1V8 233 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 C1orf134Q5TEV5 83 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 ZNF486Q96H40 463 aaPredicted RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 SEPSECSQ9HD40 501 aaKnown RBP13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 HLA-DRB4X5D2U9 266 aa13.05□□□□□ -0.32
UPK3BP1-201ENST00000428678 A0A0G2JRQ6 117 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 C3orf85A0A1B0GTC6 90 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 SMIM9A6NGZ8 99 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 SP6Q3SY56 376 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 PRSS54Q6PEW0 395 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 SIGLEC15Q6ZMC9 328 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 NIPSNAP3BQ9BS92 247 aa13.04□□□□□ -0.32
UPK3BP1-201ENST00000428678 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 SLC25A4P12235 298 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 HTR2BP41595 481 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 NKX2-1P43699 371 aaPredicted RBP13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 RNF212Q495C1 297 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 FAM222AQ5U5X8 452 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 HEYLQ9NQ87 328 aaPredicted RBP13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 COMMD3Q9UBI1 195 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 DKK2Q9UBU2 259 aa13.03□□□□□ -0.32
UPK3BP1-201ENST00000428678 GSTZ1O43708 216 aaPredicted RBP13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 DEFB1P60022 68 aa13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 SPCS3P61009 180 aa13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 RNASE12Q5GAN4 147 aaKnown RBP13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 GDF5OSQ5U4N7 250 aa13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 COPZ2Q9P299 210 aa13.02□□□□□ -0.33
UPK3BP1-201ENST00000428678 BUB3O43684 328 aa13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 APOA1P02647 267 aa13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 RNASE10Q5GAN6 216 aaKnown RBP13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 LHFPL1Q86WI0 220 aa13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 RNASEH2CQ8TDP1 164 aaKnown RBP13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 LINC00052Q96N35 136 aa13.01□□□□□ -0.33
UPK3BP1-201ENST00000428678 C16orf90A8MZG2 172 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 RD3LP0DJH9 198 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 UCP1P25874 307 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 C2orf83Q53S99 150 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 TMEM88Q6PEY1 159 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 CCDC71LQ8N9Z2 235 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 NPIPB3Q92617 1050 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 ACY3Q96HD9 319 aa13□□□□□ -0.33
UPK3BP1-201ENST00000428678 TOMM40O96008 361 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 ARRDC1Q8N5I2 433 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 SLC24A4Q8NFF2 622 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 OR4B1Q8NGF8 309 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 OR52E5Q8NH55 327 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 SAV1Q9H4B6 383 aaPredicted RBP12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 TMED3Q9Y3Q3 217 aa12.99□□□□□ -0.33
UPK3BP1-201ENST00000428678 CEBPZOSA8MTT3 80 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 HBE1P02100 147 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 CD3DP04234 171 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 ELK1P19419 428 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 AARDQ4LEZ3 155 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 ETFRF1Q6IPR1 90 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 FOXI2Q6ZQN5 318 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 FAM219AQ8IW50 185 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 ZNF709Q8N972 641 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 OR51G1Q8NGK1 321 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 OR13C8Q8NGS7 320 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 ZFAND1Q8TCF1 268 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 C7orf50Q9BRJ6 194 aaKnown RBP12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 SLC35B3Q9H1N7 401 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 KLK11Q9UBX7 282 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 GOLT1BQ9Y3E0 138 aa12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 YTHDF2Q9Y5A9 579 aaKnown RBP12.98□□□□□ -0.33
UPK3BP1-201ENST00000428678 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
UPK3BP1-201ENST00000428678 HPGDSO60760 199 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms