RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 LRRK1Q38SD2 2015 aa4.6□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGKV1-6A0A0C4DH72 117 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 TRBV6-1A0A0K0K1D8 114 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 A0A1W2PQU0 124 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 GGTLC3B5MD39 225 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 MUC22E2RYF6 1773 aaPredicted RBP4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 NPIPB6E9PJ23 425 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 H3BML4 177 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 J3QT63 122 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 NDUFS7O75251 213 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 WISP2O76076 250 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 IGHG3P01860 377 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 SLC25A5P05141 298 aaKnown RBP4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 CELA2AP08217 269 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 WFDC2Q14508 124 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 PMVKQ15126 192 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 KRTAP27-1Q3LI81 207 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF766Q5HY98 468 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 TMEM78Q5T7P6 136 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 CFAP126Q5VTH2 177 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 ZNF497Q6ZNH5 498 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 DTX1Q86Y01 620 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 Q8N7P7 452 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 NEU4Q8WWR8 484 aaPredicted RBP4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 NABP1Q96AH0 204 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 VWCEQ96DN2 955 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 CYYR1Q96J86 154 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 HIST1H4GQ99525 98 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 NABP2Q9BQ15 211 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 MBNL3Q9NUK0 354 aaKnown RBP4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 HCFC1R1Q9NWW0 138 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 OBP2AQ9NY56 170 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 B4GALT7Q9UBV7 327 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 TCF20Q9UGU0 1960 aaKnown RBP4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 PRNDQ9UKY0 176 aa4.59□□□□□ -1.67
VTI1BP4-201ENST00000427516 POLR2AP24928 1970 aaKnown RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 TNRC6AQ8NDV7 1962 aaKnown RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 ADAMTS9Q9P2N4 1935 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 A0A1W2PP55 124 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 C5orf49A4QMS7 147 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 LINC01549A6NIU2 74 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 NPIPB5A8MRT5 1133 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 TNFRSF13BO14836 293 aaPredicted RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 MGST3O14880 152 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 SPINT2O43291 252 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 HOXA3O43365 443 aaPredicted RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 COX7A2P2O60397 106 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 DPM2O94777 84 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 ACTL6BO94805 426 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 IGLV2-8P01709 118 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 CFIP05156 583 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 KIR2DL1P43626 348 aaPredicted RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF157P51786 506 aaPredicted RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 FOXA3P55318 350 aaPredicted RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 HHEXQ03014 270 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 PLGLAQ15195 96 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 C12orf74Q32Q52 190 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM30BQ3MIR4 351 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 PIP4P1Q86T03 277 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 KRTAP1-3Q8IUG1 177 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 SHISA5Q8N114 240 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 ORMDL3Q8N138 153 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 OR8A1Q8NGG7 326 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 LINC00479Q96M42 142 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 RASL11BQ9BPW5 248 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 IMUPQ9GZP8 106 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 CDIP1Q9H305 208 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 FBXL15Q9H469 300 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 C12orf49Q9H741 205 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 UBTD1Q9HAC8 227 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 NXT2Q9NPJ8 142 aaKnown RBP4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM74BQ9NUR3 256 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 VPREB3Q9UKI3 123 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 CCL26Q9Y258 94 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 FREM3P0C091 2139 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 DOCK9Q9BZ29 2069 aa4.58□□□□□ -1.68
VTI1BP4-201ENST00000427516 A0A096LPE4 126 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 A0A1W2PPZ6 126 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 LILRA5A6NI73 299 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 E9PLN8 166 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 RRHO14718 337 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 SCGB2A1O75556 95 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 IGKCP01834 107 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 MT-ATP8P03928 68 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 FAM106CPP0CH98 169 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 DUTP33316 252 aaKnown RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 MEOX1P50221 254 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 XGP55808 180 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 RPS28P62857 69 aaKnown RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 CACNG7P62955 275 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 PLP2Q04941 152 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 ZNF816Q0VGE8 651 aaPredicted RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 CCL14Q16627 93 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 FAM106AQ4KMX7 169 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 TM4SF20Q53R12 229 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 SPATA31B1PQ5VZV4 182 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 KIR3DL3Q8N743 410 aa4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 RBMXL3Q8N7X1 1067 aaKnown RBP4.57□□□□□ -1.68
VTI1BP4-201ENST00000427516 TMEM178AQ8NBL3 297 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms