RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ATP6V0E1O15342 81 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 CXorf1O96002 111 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 DEFA5Q01523 94 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 C9orf139Q6ZV77 190 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 RXFP4Q8TDU9 374 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 FUT9Q9Y231 359 aa11.96□□□□□ -0.49
ACTB-204ENST00000425660 PRRC2AP48634 2157 aaKnown RBP11.96□□□□□ -0.5
ACTB-204ENST00000425660 ABCA1O95477 2261 aa11.96□□□□□ -0.5
ACTB-204ENST00000425660 H3BUX3 64 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 IGLC1P0CG04 106 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
ACTB-204ENST00000425660 AKIRIN2Q53H80 203 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 FAM78BQ5VT40 261 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 SPNS3Q6ZMD2 512 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
ACTB-204ENST00000425660 ZNF48Q96MX3 618 aaPredicted RBP11.95□□□□□ -0.5
ACTB-204ENST00000425660 PITPNC1Q9UKF7 332 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 IGHV3-21A0A0B4J1V1 117 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 M0QZK8 103 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 CLN5O75503 358 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 SCO1O75880 301 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 ARL14EPLP0DKL9 152 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 MEF2BQ02080 365 aaPredicted RBP11.95□□□□□ -0.5
ACTB-204ENST00000425660 SPATA31B1PQ5VZV4 182 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 ATRAIDQ6UW56 229 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 WFDC11Q8NEX6 87 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 NANPQ8TBE9 248 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 PFDN5Q99471 154 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 RNF2Q99496 336 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 MRPL32Q9BYC8 188 aaKnown RBP11.95□□□□□ -0.5
ACTB-204ENST00000425660 THYN1Q9P016 225 aa11.95□□□□□ -0.5
ACTB-204ENST00000425660 PLP1P60201 277 aa11.94□□□□□ -0.5
ACTB-204ENST00000425660 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
ACTB-204ENST00000425660 CYB561D1Q8N8Q1 229 aa11.94□□□□□ -0.5
ACTB-204ENST00000425660 OR1L4Q8NGR5 311 aa11.94□□□□□ -0.5
ACTB-204ENST00000425660 DNAJC4Q9NNZ3 241 aa11.94□□□□□ -0.5
ACTB-204ENST00000425660 NOTCH2Q04721 2471 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
ACTB-204ENST00000425660 SNAPINO95295 136 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 CD81P60033 236 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 SOHLH1Q5JUK2 328 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 MIR17HGQ75NE6 70 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 FOXC2Q99958 501 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 TMUB1Q9BVT8 246 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 LINC01548A6NM66 108 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 IGKV1-17P01599 117 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 HIST1H1BP16401 226 aaKnown RBP11.93□□□□□ -0.5
ACTB-204ENST00000425660 C19orf54Q5BKX5 351 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 PATE2Q6UY27 113 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
ACTB-204ENST00000425660 NKX6-2Q9C056 277 aaPredicted RBP11.93□□□□□ -0.5
ACTB-204ENST00000425660 TECRQ9NZ01 308 aaKnown RBP11.93□□□□□ -0.5
ACTB-204ENST00000425660 CSPG4Q6UVK1 2322 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 TRBV9A0A0B4J1U6 114 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 IGF1P05019 195 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 GCHFRP30047 84 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 FCGR2BP31994 310 aaPredicted RBP11.92□□□□□ -0.5
ACTB-204ENST00000425660 TAS2R45P59539 299 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 DEFB112Q30KQ8 113 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 PQLC2Q6ZP29 291 aa11.92□□□□□ -0.5
ACTB-204ENST00000425660 ITPR3Q14573 2671 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 CCDC168Q8NDH2 2452 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 SH2D7A6NKC9 451 aaPredicted RBP11.91□□□□□ -0.5
ACTB-204ENST00000425660 F8W735 103 aaPredicted RBP11.91□□□□□ -0.5
ACTB-204ENST00000425660 TMEM250H0YL14 139 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 COX7A2P2O60397 106 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 PAGE4O60829 102 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 IGHG2P01859 326 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 C8orf88P0DMB2 117 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 NPBWR1P48145 328 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 ECSCRQ19T08 205 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 C10orf113Q5VZT2 155 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 FAM90A2PQ658T7 463 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 IQCF2Q8IXL9 164 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 BCL6BQ8N143 479 aaPredicted RBP11.91□□□□□ -0.5
ACTB-204ENST00000425660 SUN5Q8TC36 379 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 GSX1Q9H4S2 264 aaPredicted RBP11.91□□□□□ -0.5
ACTB-204ENST00000425660 ARL2-SNX15V9GYD0 113 aa11.91□□□□□ -0.5
ACTB-204ENST00000425660 TRAV30A0A087WSZ9 112 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 PSG1P11464 419 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 MFAP4P55083 255 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 LY6EQ16553 131 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 CLRN3Q8NCR9 226 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 VN1R17PQ8TDU5 208 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 FAM167A-AS1Q96KT0 104 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 C21orf62Q9NYP8 219 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 TEX15Q9BXT5 2789 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 G3V318 75 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 OR2J3O76001 311 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 NDUFB8O95169 186 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 FABP1P07148 127 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 IER3P46695 156 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 MORN5Q5VZ52 161 aa11.9□□□□□ -0.5
ACTB-204ENST00000425660 CIARTQ8N365 385 aaPredicted RBP11.9□□□□□ -0.5
ACTB-204ENST00000425660 TXN2Q99757 166 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms