RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 BLNKQ8WV28 456 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 FAM103A1Q9BTL3 118 aaKnown RBP9.27□□□□□ -0.92
UBR4-207ENST00000425413 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.92
UBR4-207ENST00000425413 TMEM167BQ9NRX6 74 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 SIGLEC9Q9Y336 463 aa9.27□□□□□ -0.92
UBR4-207ENST00000425413 IGKV1D-37A0A075B6S9 117 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 TRAV34A0A0B4J273 112 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 TIMM23O14925 209 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 GGCTO75223 188 aaKnown RBP9.27□□□□□ -0.93
UBR4-207ENST00000425413 LGALS7P47929 136 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 ZNF137PP52743 207 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 CACNG8Q8WXS5 425 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 IMMP2LQ96T52 175 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 SLC25A2Q9BXI2 301 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 S4R3C0 116 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 FNDC10F2Z333 226 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 CNIH1O95406 144 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 GZMBP10144 247 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 EAF1Q96JC9 268 aaPredicted RBP9.27□□□□□ -0.93
UBR4-207ENST00000425413 RAB1BQ9H0U4 201 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 TNFRSF19Q9NS68 423 aa9.27□□□□□ -0.93
UBR4-207ENST00000425413 DDTP30046 118 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 PKIAP61925 76 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 HES1Q14469 280 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 MMDQ15546 238 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 PPP1R27Q86WC6 154 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 MMD2Q8IY49 270 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 OR4A5Q8NH83 315 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 C14orf144Q96I85 54 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 SERTAD4Q9NUC0 356 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 A0A1W2PPR1 153 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 CBLN1P23435 193 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 CNN1P51911 297 aaKnown RBP9.26□□□□□ -0.93
UBR4-207ENST00000425413 RANP62826 216 aaKnown RBP9.26□□□□□ -0.93
UBR4-207ENST00000425413 FBXL19-AS1Q494R0 122 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 FBLN7Q53RD9 439 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 FAM71F2Q6NXP2 309 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 LINC00305Q7Z4B0 112 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 RNASEH2CQ8TDP1 164 aaKnown RBP9.26□□□□□ -0.93
UBR4-207ENST00000425413 FAM167A-AS1Q96KT0 104 aa9.26□□□□□ -0.93
UBR4-207ENST00000425413 TCRBV4S1A1TA0A5B7 111 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 GATCO43716 136 aaKnown RBP9.25□□□□□ -0.93
UBR4-207ENST00000425413 TOX4O94842 621 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 LIPFP07098 398 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
UBR4-207ENST00000425413 LINC00469Q8N7U9 141 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 TXNDC17Q9BRA2 123 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 PAXXQ9BUH6 204 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 GRIFINA4D1Z8 144 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 CA1P00915 261 aaPredicted RBP9.25□□□□□ -0.93
UBR4-207ENST00000425413 GNG5P63218 68 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 TMEM256Q8N2U0 113 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 TMEM18Q96B42 140 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 TIMD4Q96H15 378 aa9.25□□□□□ -0.93
UBR4-207ENST00000425413 PSMB11A5LHX3 300 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 UQCRFS1P47985 274 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 COMPP49747 757 aaPredicted RBP9.24□□□□□ -0.93
UBR4-207ENST00000425413 ATP5IP56385 69 aaPredicted RBP9.24□□□□□ -0.93
UBR4-207ENST00000425413 SSX2Q16385 188 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 KLF17Q5JT82 389 aaPredicted RBP9.24□□□□□ -0.93
UBR4-207ENST00000425413 LURAP1LQ8IV03 231 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 SRSF12Q8WXF0 261 aaKnown RBP9.24□□□□□ -0.93
UBR4-207ENST00000425413 SCGB1D1O95968 90 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 PRR27Q6MZM9 219 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 OR8I2Q8N0Y5 310 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 KIR3DL3Q8N743 410 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 C11orf52Q96A22 123 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 UBTD1Q9HAC8 227 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 CBLN4Q9NTU7 201 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 TIGITQ495A1 244 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 PRR31Q5SQ13 230 aa9.24□□□□□ -0.93
UBR4-207ENST00000425413 CFAP46Q8IYW2 2715 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 CACNA1AO00555 2505 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 A0A1B0GV90 55 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 RBP4P02753 201 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 CD99P14209 185 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 IER3P46695 156 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 BPIFB3P59826 476 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 USF2Q15853 346 aaPredicted RBP9.23□□□□□ -0.93
UBR4-207ENST00000425413 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 SSBP3Q9BWW4 388 aaPredicted RBP9.23□□□□□ -0.93
UBR4-207ENST00000425413 ZFYVE26Q68DK2 2539 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 LOC105371242A0A075B767 164 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 TEX22C9J3V5 150 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 NUPR1O60356 82 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 CD33P20138 364 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 HTR1DP28221 377 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 ADMP35318 185 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 LYZP61626 148 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 LCN2P80188 198 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 OR5R1Q8NH85 324 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 CELSR1Q9NYQ6 3014 aa9.23□□□□□ -0.93
UBR4-207ENST00000425413 TYMSP04818 313 aa9.22□□□□□ -0.93
UBR4-207ENST00000425413 CRYGBP07316 175 aa9.22□□□□□ -0.93
UBR4-207ENST00000425413 RPL15P61313 204 aaKnown RBP9.22□□□□□ -0.93
UBR4-207ENST00000425413 BEND2Q8NDZ0 799 aa9.22□□□□□ -0.93
UBR4-207ENST00000425413 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms