RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZNF550Q7Z398 422 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SPATA12Q7Z6I5 190 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM150AQ86TG1 271 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM25Q86YD3 366 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TTC9CQ8N5M4 171 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 OR2M3Q8NG83 312 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 OR8S1Q8NH09 359 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 CT55Q8WUE5 264 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 RERGQ96A58 199 aaPredicted RBP2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM19Q96E16 107 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 WDR34Q96EX3 536 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 PELI1Q96FA3 418 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 AMELYQ99218 206 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM3Q9BZL3 60 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 COA1Q9GZY4 146 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 BANF2Q9H503 90 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 C11orf1Q9H5F2 150 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 PLEKHF2Q9H8W4 249 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ZDHHC11Q9H8X9 412 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 ST20Q9HBF5 79 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 SH2D2AQ9NP31 389 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 PXMP2Q9NR77 195 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 CLCF1Q9UBD9 225 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 TP73-AS1Q9UF72 201 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 NAT8BQ9UHF3 227 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 CRLS1Q9UJA2 301 aa2.12□□□□□ -2.07
LINC01040-201ENST00000425048 CENPVL3A0A0U1RRI6 287 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 C7orf71A4D174 169 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 GRIFINA4D1Z8 144 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 MBLAC1A4D2B0 266 aaPredicted RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 LRP5LA4QPB2 252 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 DPRXA6NFQ7 191 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 SLC22A20A6NK97 555 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM212A6NML5 194 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CD300LBA8K4G0 201 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 C21orf140B9A014 251 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 F5H5K5 113 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CCDC179H3BU77 68 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 M0R1X1 148 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CHEK1O14757 476 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 DEGS1O15121 323 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 EFNA2O43921 213 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 UPK3AO75631 287 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 STK17BO94768 372 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 RCBTB2O95199 551 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CYB5AP00167 134 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CA2P00918 260 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 HBE1P02100 147 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 MT-ATP8P03928 68 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CATP04040 527 aaKnown RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 PET100P0DJ07 73 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 BCL2P10415 239 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CYBAP13498 195 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 SRIP30626 198 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 HRH1P35367 487 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CCR2P41597 374 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 GUCA1AP43080 201 aaPredicted RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CLDN6P56747 220 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 FXYD6P3P58550 94 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 LCN6P62502 163 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF117Q03924 483 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 ATP5G2Q06055 141 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR8B8Q15620 311 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 PMCHL1Q16048 86 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CCL15Q16663 113 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 Q499Y3 187 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TIMM23BQ5SRD1 257 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM78Q5T7P6 136 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM215Q68D42 235 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 GLIPR1L1Q6UWM5 242 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 C12orf54Q6X4T0 127 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 C2orf91Q6ZV80 131 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OOSP2Q86WS3 158 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF695Q8IW36 515 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 SLC35F2Q8IXU6 374 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 DEFB106AQ8N104 65 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 UMODL1-AS1Q8N2C9 162 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 SYS1Q8N2H4 156 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR2L13Q8N349 312 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM251Q8N6I4 163 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF676Q8N7Q3 588 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 CDRT4Q8N9R6 151 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 LRRC75AQ8NAA5 344 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR10P1Q8NGE3 313 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR5D14Q8NGL3 314 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR10G9Q8NGN4 311 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR2K2Q8NGT1 345 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR5H2Q8NGV7 314 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 OR2G3Q8NGZ4 309 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 KCNG3Q8TAE7 436 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 C18orf32Q8TCD1 76 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 SKA2Q8WVK7 121 aaPredicted RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 PP6455Q8WZ26 134 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM54Q969K7 222 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 RBMXL1Q96E39 390 aaKnown RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 RNF185Q96GF1 192 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 DNAJC30Q96LL9 226 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 NAA38Q9BRA0 125 aaKnown RBP2.11□□□□□ -2.07
LINC01040-201ENST00000425048 TIMM29Q9BSF4 260 aa2.11□□□□□ -2.07
LINC01040-201ENST00000425048 EBPLQ9BY08 206 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms