RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 EWSR1Q01844 656 aaKnown RBP eCLIP6.85□□□□□ -1.31
NUP50-206ENST00000422489 TMEM187Q14656 261 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 BSXQ3C1V8 233 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 LEMD1Q68G75 181 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 LYZL2Q7Z4W2 148 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 TMED4Q7Z7H5 227 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 SLC24A4Q8NFF2 622 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 STXBP6Q8NFX7 210 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 RARRES2Q99969 163 aa6.85□□□□□ -1.31
NUP50-206ENST00000422489 SLIRPQ9GZT3 109 aaKnown RBP6.85□□□□□ -1.31
NUP50-206ENST00000422489 SLC25A4P12235 298 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 ANXA3P12429 323 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 NPY1RP25929 384 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 OR10J1P30954 320 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 FAUP35544 74 aaKnown RBP6.84□□□□□ -1.31
NUP50-206ENST00000422489 P2RY1P47900 373 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 TNFRSF9Q07011 255 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 AARDQ4LEZ3 155 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 C2orf83Q53S99 150 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 ETFRF1Q6IPR1 90 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 PRSS54Q6PEW0 395 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 NOXA1Q86UR1 476 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 LGI3Q8N145 548 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 FAM24BQ8N5W8 94 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 TMEM217Q8N7C4 229 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 OR1S2Q8NGQ3 325 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 OR1S1Q8NH92 325 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 RNASEH2CQ8TDP1 164 aaKnown RBP6.84□□□□□ -1.31
NUP50-206ENST00000422489 NPIPB3Q92617 1050 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 IL22RA2Q969J5 263 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 ACY3Q96HD9 319 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 GRAMD2BQ96HH9 432 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 SOSTQ9BQB4 213 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 RBKSQ9H477 322 aa6.84□□□□□ -1.31
NUP50-206ENST00000422489 LY6G6CO95867 125 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 CA1P00915 261 aaPredicted RBP6.83□□□□□ -1.32
NUP50-206ENST00000422489 IGKV1-17P01599 117 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 IFNA4P05014 189 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 IGLC1P0CG04 106 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 RD3LP0DJH9 198 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 CRYBB3P26998 211 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 S100A5P33763 92 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 CCR6P51684 374 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 AP3S2P59780 193 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 SUPT4H1P63272 117 aaKnown RBP6.83□□□□□ -1.32
NUP50-206ENST00000422489 SMCO1Q147U7 214 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 CEMP1Q6PRD7 247 aaPredicted RBP6.83□□□□□ -1.32
NUP50-206ENST00000422489 STHQ8IWL8 128 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 TOMM5Q8N4H5 51 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 OR11H2Q8NH07 326 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 DTD1Q8TEA8 209 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 CACFD1Q9UGQ2 172 aa6.83□□□□□ -1.32
NUP50-206ENST00000422489 PAIP2BQ9ULR5 123 aaKnown RBP6.83□□□□□ -1.32
NUP50-206ENST00000422489 TRAV2A0A0B4J234 112 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 A0A0B4J2A0 478 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 KNCNA6PVL3 124 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 K7EQG2 157 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 DEFB4AO15263 64 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 IL4P05112 153 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 HNRNPCP07910 306 aaKnown RBP eCLIP6.82□□□□□ -1.32
NUP50-206ENST00000422489 ZNF688P0C7X2 276 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 VAMP1P23763 118 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 EIF2B2P49770 351 aaKnown RBP6.82□□□□□ -1.32
NUP50-206ENST00000422489 YPEL3P61236 119 aaPredicted RBP6.82□□□□□ -1.32
NUP50-206ENST00000422489 SRPXP78539 464 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 DHRS2Q13268 280 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 KLF9Q13886 244 aaPredicted RBP6.82□□□□□ -1.32
NUP50-206ENST00000422489 NMSQ5H8A3 153 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 GATAD1Q8WUU5 269 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 TMEM170AQ8WVE7 144 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 SHPKQ9UHJ6 478 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 KLK5Q9Y337 293 aaPredicted RBP6.82□□□□□ -1.32
NUP50-206ENST00000422489 U3KQ87 197 aa6.82□□□□□ -1.32
NUP50-206ENST00000422489 NUPR2A6NF83 97 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 HELTA6NFD8 242 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 PSG1P11464 419 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 AP2S1P53680 142 aaPredicted RBP6.81□□□□□ -1.32
NUP50-206ENST00000422489 ACTL10Q5JWF8 245 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 PBDC1Q9BVG4 233 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 HSPB7Q9UBY9 170 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 FBXL17Q9UF56 701 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 DNAH7Q8WXX0 4024 aa6.81□□□□□ -1.32
NUP50-206ENST00000422489 RYR2Q92736 4967 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 ZFP92A6NM28 416 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 TOMM40O96008 361 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 HOXB5P09067 269 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 IAPPP10997 89 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 GPX4P36969 197 aaPredicted RBP6.8□□□□□ -1.32
NUP50-206ENST00000422489 INPP1P49441 399 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 NANOS2P60321 138 aaKnown RBP6.8□□□□□ -1.32
NUP50-206ENST00000422489 USF2Q15853 346 aaPredicted RBP6.8□□□□□ -1.32
NUP50-206ENST00000422489 TMEM128Q5BJH2 165 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 PSMG4Q5JS54 123 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 OR51G1Q8NGK1 321 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 C11orf45Q8TAV5 145 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 PHLDA1Q8WV24 401 aaPredicted RBP6.8□□□□□ -1.32
NUP50-206ENST00000422489 SLC35E1Q96K37 410 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 RAB40CQ96S21 281 aa6.8□□□□□ -1.32
NUP50-206ENST00000422489 SLC25A21Q9BQT8 299 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms