RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 TMEM61Q8N0U2 210 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 C12orf45Q8N5I9 185 aaPredicted RBP11.1□□□□□ -0.63
CHD1-202ENST00000414220 ACY3Q96HD9 319 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 METTL26Q96S19 204 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 SPAG8Q99932 426 aaPredicted RBP11.1□□□□□ -0.63
CHD1-202ENST00000414220 RHPN1-AS1Q9BWJ2 59 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 GSKIPQ9P0R6 139 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 TBC1D24Q9ULP9 559 aa11.1□□□□□ -0.63
CHD1-202ENST00000414220 STRAPQ9Y3F4 350 aaKnown RBP11.1□□□□□ -0.63
CHD1-202ENST00000414220 IGHV3OR16-8A0A075B7F1 116 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 ZNF785A8K8V0 405 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 A8MZ25 164 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 SCGB1D2O95969 90 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 IGHV4-30-4P0DP06 118 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 EDN2P20800 178 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 CMC4P56277 68 aaPredicted RBP11.09□□□□□ -0.63
CHD1-202ENST00000414220 YPEL3P61236 119 aaPredicted RBP11.09□□□□□ -0.63
CHD1-202ENST00000414220 ID3Q02535 119 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 SPANXN5Q5MJ07 72 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 Q8N1Y9 231 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 NPIPB3Q92617 1050 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 WDR89Q96FK6 387 aaPredicted RBP11.09□□□□□ -0.63
CHD1-202ENST00000414220 GRAMD2BQ96HH9 432 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 PFDN2Q9UHV9 154 aa11.09□□□□□ -0.63
CHD1-202ENST00000414220 C5orf51A6NDU8 294 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 OR4C46A6NHA9 309 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 FAM25EA8MYX2 175 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 TSPAN4O14817 238 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 FRMD6-AS1P0C7T7 363 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 TIGITQ495A1 244 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 ZBTB8BQ8NAP8 495 aaPredicted RBP11.08□□□□□ -0.64
CHD1-202ENST00000414220 TMEM170AQ8WVE7 144 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 RAB40CQ96S21 281 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 ZMAT4Q9H898 229 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 PSENENQ9NZ42 101 aa11.08□□□□□ -0.64
CHD1-202ENST00000414220 ZFP92A6NM28 416 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 OR11H12B2RN74 326 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 CHEK1O14757 476 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 PRAF2O60831 178 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 IL5P05113 134 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 RD3LP0DJH9 198 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 EIF2B2P49770 351 aaKnown RBP11.07□□□□□ -0.64
CHD1-202ENST00000414220 POLR2GP62487 172 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHD1-202ENST00000414220 OR4D5Q8NGN0 318 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 SEC22CQ9BRL7 303 aa11.07□□□□□ -0.64
CHD1-202ENST00000414220 MRPL36Q9P0J6 103 aaKnown RBP11.07□□□□□ -0.64
CHD1-202ENST00000414220 MPTX1A8MV57 137 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 L7N2F9 121 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 SSSCA1O60232 199 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 PVALBP20472 110 aaPredicted RBP11.06□□□□□ -0.64
CHD1-202ENST00000414220 RPL11P62913 178 aaKnown RBP11.06□□□□□ -0.64
CHD1-202ENST00000414220 VAMP2P63027 116 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 GSG1LQ6UXU4 331 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 SMIM8Q96KF7 97 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 ASCL2Q99929 193 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 ZFAND3Q9H8U3 227 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 SELENOKQ9Y6D0 94 aa11.06□□□□□ -0.64
CHD1-202ENST00000414220 INMT-MINDY4F8WBC2 141 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 DNASE2O00115 360 aaPredicted RBP11.05□□□□□ -0.64
CHD1-202ENST00000414220 TOMM40O96008 361 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 CFDP00746 253 aaPredicted RBP11.05□□□□□ -0.64
CHD1-202ENST00000414220 CD7P09564 240 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 S100A7P31151 101 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 NUP62P37198 522 aaPredicted RBP11.05□□□□□ -0.64
CHD1-202ENST00000414220 TAS2R30P59541 319 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 GAMTQ14353 236 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 C11orf87Q6NUJ2 197 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 NRARPQ7Z6K4 114 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 RNF2Q99496 336 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 C19orf73Q9NVV2 129 aa11.05□□□□□ -0.64
CHD1-202ENST00000414220 IGHV3OR16-13A0A075B7E8 117 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 IGHV3-49A0A0A0MS15 119 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 IGHV3-74A0A0B4J1X5 117 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 SNRPGP15A8MWD9 76 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 H3BP45 60 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 TSC22D2O75157 780 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 IL4P05112 153 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
CHD1-202ENST00000414220 AP2S1P53680 142 aaPredicted RBP11.04□□□□□ -0.64
CHD1-202ENST00000414220 TCF24Q7RTU0 167 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 OR10P1Q8NGE3 313 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 OR51G1Q8NGK1 321 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 C2orf50Q96LR7 162 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 RABAC1Q9UI14 185 aa11.04□□□□□ -0.64
CHD1-202ENST00000414220 DNAH3Q8TD57 4116 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 HELTA6NFD8 242 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 CCSO14618 274 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 CRYBB3P26998 211 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 IFITM3Q01628 133 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 AKR1C1Q04828 323 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 SBSPONQ8IVN8 264 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 DEFB125Q8N687 156 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 ST8SIA2Q92186 375 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 SRD5A3Q9H8P0 318 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 U3KQK5 164 aa11.03□□□□□ -0.64
CHD1-202ENST00000414220 PSG1P11464 419 aa11.02□□□□□ -0.65
CHD1-202ENST00000414220 BCAP31P51572 246 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms