RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FAM216BQ8N7L0 139 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 NPIPB3Q92617 1050 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 RND1Q92730 232 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 URB1-AS1Q96HZ7 61 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 GPR82Q96P67 336 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 ZNF492Q9P255 531 aa14.24□□□□□ -0.13
SDCBP-202ENST00000413219 DSCAMO60469 2012 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 MBD3L4A6NDZ8 208 aaPredicted RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 MBD3L3A6NE82 208 aaPredicted RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 MBD3L5A6NJ08 208 aaPredicted RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 VWC2LB2RUY7 222 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 TNFSF4P23510 183 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 REG1BP48304 166 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 FAM120AOSQ5T036 256 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 ASPHD1Q5U4P2 390 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 TEX36Q5VZQ5 186 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 ZNF841Q6ZN19 808 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 DEFB108BQ8NET1 73 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 MBD3L2Q8NHZ7 208 aaPredicted RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 FLYWCH2Q96CP2 140 aaKnown RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 PERPQ96FX8 193 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 MLST8Q9BVC4 326 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 PRSS22Q9GZN4 317 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 RPP21Q9H633 154 aaKnown RBP14.23□□□□□ -0.13
SDCBP-202ENST00000413219 PRR14LQ5THK1 2151 aa14.23□□□□□ -0.13
SDCBP-202ENST00000413219 A8MWL6 223 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 CORTO00230 105 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 CDX4O14627 284 aaPredicted RBP14.22□□□□□ -0.13
SDCBP-202ENST00000413219 CCL11P51671 97 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 MEF2CQ06413 473 aaPredicted RBP14.22□□□□□ -0.13
SDCBP-202ENST00000413219 RBMXL3Q8N7X1 1067 aaKnown RBP14.22□□□□□ -0.13
SDCBP-202ENST00000413219 FDCSPQ8NFU4 85 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 ZNRD1Q9P1U0 126 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 IGHV1-46P01743 117 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 SLC25A5P05141 298 aaKnown RBP14.22□□□□□ -0.13
SDCBP-202ENST00000413219 WT1-ASQ06250 92 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 FAM71F2Q6NXP2 309 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 VHLLQ6RSH7 139 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 SSX8Q7RTT4 187 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 LINC00305Q7Z4B0 112 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 ZCCHC24Q8N2G6 241 aaKnown RBP14.22□□□□□ -0.13
SDCBP-202ENST00000413219 GFRA4Q9GZZ7 299 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 FRYQ5TBA9 3013 aa14.22□□□□□ -0.13
SDCBP-202ENST00000413219 IGHV2-70DA0A0C4DH43 119 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 CGB1A6NKQ9 187 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 E7EUB6 86 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 GNG5P63218 68 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 PLA2G2CQ5R387 149 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 SPATA12Q7Z6I5 190 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 OR4C13Q8NGP0 309 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 VPS13AQ96RL7 3174 aa14.21□□□□□ -0.13
SDCBP-202ENST00000413219 OR4C46A6NHA9 309 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 RBX1P62877 108 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 KIR3DL3Q8N743 410 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 FMC1Q96HJ9 113 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 LOXL4Q96JB6 756 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.14
SDCBP-202ENST00000413219 HEATR1Q9H583 2144 aaKnown RBP14.21□□□□□ -0.14
SDCBP-202ENST00000413219 TNCP24821 2201 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 FAM231BA6NCW3 169 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 FBLN7Q53RD9 439 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 LRRC10Q5BKY1 277 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 SEM1Q6ZVN7 128 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 RNASE8Q8TDE3 154 aaKnown RBP14.2□□□□□ -0.14
SDCBP-202ENST00000413219 CLEC5AQ9NY25 188 aa14.2□□□□□ -0.14
SDCBP-202ENST00000413219 C19orf71A6NCJ1 209 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 PGPA6NDG6 321 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 SYS1-DBNDD2H3BUS1 97 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 OR5AL1P0C617 328 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 ETFRF1Q6IPR1 90 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 ALKBH2Q6NS38 261 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 TCF24Q7RTU0 167 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 C5orf17Q8NAS9 161 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 TECTAO75443 2155 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 MOSP00540 346 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 LTAP01374 205 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 C21orf62-AS1Q17RA5 79 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 OR10X1Q8NGY0 326 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 C22orf15Q8WYQ4 148 aa14.19□□□□□ -0.14
SDCBP-202ENST00000413219 IGHV1-24A0A0C4DH33 117 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 NKX2-8O15522 239 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 P01737 135 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 CRYGCP07315 174 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 PVRIGQ6DKI7 326 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 ZNF474Q6S9Z5 364 aaPredicted RBP14.18□□□□□ -0.14
SDCBP-202ENST00000413219 TRGV9Q99603 122 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 RAI1Q7Z5J4 1906 aaPredicted RBP14.18□□□□□ -0.14
SDCBP-202ENST00000413219 TRAV30A0A087WSZ9 112 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 IGLV2-23P01705 113 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 NBEAP1P0C6P0 100 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 RBPMS2Q6ZRY4 209 aaKnown RBP14.18□□□□□ -0.14
SDCBP-202ENST00000413219 Q6ZVH6 145 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 C8orf31Q8N9H6 132 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 NDFIP1Q9BT67 221 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 TMEM191AQ9H0A3 160 aa14.18□□□□□ -0.14
SDCBP-202ENST00000413219 MRPL36Q9P0J6 103 aaKnown RBP14.18□□□□□ -0.14
SDCBP-202ENST00000413219 LOC105371242A0A075B767 164 aa14.17□□□□□ -0.14
SDCBP-202ENST00000413219 LEPROTL1O95214 131 aa14.17□□□□□ -0.14
SDCBP-202ENST00000413219 RPS20P60866 119 aaKnown RBP14.17□□□□□ -0.14
SDCBP-202ENST00000413219 LINC00311Q8N616 119 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms