RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 TMEM144Q7Z5S9 345 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 MKXQ8IYA7 352 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 SAXO1Q8IYX7 474 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 CMTM1Q8IZ96 169 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 SELENOHQ8IZQ5 122 aaKnown RBP4.23□□□□□ -1.73
LINC00342-201ENST00000412393 C11orf42Q8N5U0 333 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 OR2D3Q8NGH3 330 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 OR52M1Q8NGK5 317 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 LINC01006Q8NI28 216 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 SNX22Q96L94 193 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 MIEN1Q9BRT3 115 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 SMIM3Q9BZL3 60 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 MAGT1Q9H0U3 335 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 FAM234AQ9H0X4 552 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 PRO1933Q9H354 126 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 BANF2Q9H503 90 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 SEPSECSQ9HD40 501 aaKnown RBP4.23□□□□□ -1.73
LINC00342-201ENST00000412393 RPRMQ9NS64 109 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 PLEKHJ1Q9NW61 149 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 MTCH1Q9NZJ7 389 aa4.23□□□□□ -1.73
LINC00342-201ENST00000412393 A0A1W2PP11 408 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 XKRY2A2RUG3 117 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 FAM24AA6NFZ4 105 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 C17orf98A8MV24 154 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 H0Y980 276 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 H3BUX3 64 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 K7EP13 123 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 TIMM23O14925 209 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 ZNF737O75373 536 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 TMEM50AO95807 157 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 HAND1O96004 215 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 NAPSAO96009 420 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 HRASP01112 189 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 IFNA5P01569 189 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 BCL3P20749 454 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 OR3A1P47881 315 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 DYNLT3P51808 116 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 DLX6P56179 175 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 RBX1P62877 108 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 EDDM3AQ14507 147 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 LY6EQ16553 131 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 ATP6V1FQ16864 119 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 BSXQ3C1V8 233 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 LEMD1Q68G75 181 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 SSX7Q7RTT5 188 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 RTN4RL2Q86UN3 420 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 FOXRED2Q8IWF2 684 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 Q8IYB0 196 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 FAM58AQ8N1B3 248 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 OR5C1Q8NGR4 320 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 OR2T10Q8NGZ9 312 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 PPP1R35Q8TAP8 253 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 RAX2Q96IS3 184 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 GPER1Q99527 375 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 NKX3-1Q99801 234 aaPredicted RBP4.22□□□□□ -1.73
LINC00342-201ENST00000412393 CITED1Q99966 193 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 ABHD14AQ9BUJ0 271 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 PARP12Q9H0J9 701 aaKnown RBP4.22□□□□□ -1.73
LINC00342-201ENST00000412393 C16orf95Q9H693 158 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 ZNF286AQ9HBT8 521 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 FKBP11Q9NYL4 201 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 IL36RNQ9UBH0 155 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 ZFP30Q9Y2G7 519 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 PLXNB1O43157 2135 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 MGAM2Q2M2H8 2515 aa4.22□□□□□ -1.73
LINC00342-201ENST00000412393 SAA2-SAA4A0A096LPE2 208 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 hADV38S2A0JD32 116 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 NPIPB11E5RHQ5 1161 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 M0QZ24 198 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 SIRPB1O00241 398 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 CHST1O43916 411 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 PDCD6O75340 191 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 HPRT1P00492 218 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 PPYP01298 95 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 RBP4P02753 201 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 FUT3P21217 361 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 BRS3P32247 399 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 KIR2DS4P43632 304 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 CNN1P51911 297 aaKnown RBP4.21□□□□□ -1.74
LINC00342-201ENST00000412393 RPL23P62829 140 aaKnown RBP4.21□□□□□ -1.74
LINC00342-201ENST00000412393 VAMP2P63027 116 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 MEF2BQ02080 365 aaPredicted RBP4.21□□□□□ -1.74
LINC00342-201ENST00000412393 MEF2CQ06413 473 aaPredicted RBP4.21□□□□□ -1.74
LINC00342-201ENST00000412393 Q0VG73 95 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 ZNF146Q15072 292 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 MSMO1Q15800 293 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 SP6Q3SY56 376 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 TMEM41BQ5BJD5 291 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 SLC35E4Q6ICL7 350 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 TOMM20LQ6UXN7 152 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 ZNF66Q6ZN08 573 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 C6orf201Q7Z4U5 140 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 LHFPL4Q7Z7J7 247 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 TPRX1Q8N7U7 411 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 OR5D18Q8NGL1 313 aa4.21□□□□□ -1.74
LINC00342-201ENST00000412393 ORAOV1Q8WV07 137 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms