RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ZNF878C9JN71 531 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 F5H5K5 113 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 LINC01619G3V211 115 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 H3BUA1 57 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CDIPTO14735 213 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF207O43670 478 aaKnown RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CDRT1O95170 752 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 NDUFB2O95178 105 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TRBV12-3P01733 135 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGLV7-43P04211 117 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CDK1P06493 297 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GPX2P18283 190 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PSMB9P28065 219 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HLA-DMAP28067 261 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HSD11B1P28845 292 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CD34P28906 385 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RANBP1P43487 201 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GABRA2P47869 451 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 KCNJ3P48549 501 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CMC4P56277 68 aaPredicted RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 RAB25P57735 213 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GNG11P61952 73 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TSPAN5P62079 268 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 BLCAPP62952 87 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PAFAH1B2P68402 229 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ATP5G2Q06055 141 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TNFRSF9Q07011 255 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 DYNC1I2Q13409 638 aaKnown RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ENDOGQ14249 297 aaKnown RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 USF2Q15853 346 aaPredicted RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SSX1Q16384 188 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CEACAM21Q3KPI0 293 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 DOCK11Q5JSL3 2073 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SPIN3Q5JUX0 258 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 DEGS2Q6QHC5 323 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGFL1Q6UW32 110 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HEPN1Q6WQI6 88 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ANGPTL5Q86XS5 388 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CLECL1Q8IZS7 167 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR5AS1Q8N127 324 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 C4orf33Q8N1A6 199 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 KRTCAP2Q8N6L1 136 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF676Q8N7Q3 588 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ASCC1Q8N9N2 400 aaKnown RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR11H1Q8NG94 326 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR5A2Q8NGI9 324 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR4D6Q8NGJ1 314 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR5H2Q8NGV7 314 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR2T10Q8NGZ9 312 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR2T4Q8NH00 348 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR2T27Q8NH04 317 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 OR52N1Q8NH53 320 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 GHSRQ92847 366 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 HMCN1Q96RW7 5635 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CCL13Q99616 98 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 COPS4Q9BT78 406 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 SAMD10Q9BYL1 202 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CST11Q9H112 138 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ABCG5Q9H222 651 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ARV1Q9H2C2 271 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 TMEM133Q9H2Q1 129 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 DMBT1Q9UGM3 2413 aaPredicted RBP1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 CYB5R1Q9UHQ9 305 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 PRO0628Q9UI54 55 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ZNF257Q9Y2Q1 563 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 ORC6Q9Y5N6 252 aa1.53□□□□□ -2.16
RNU6-1140P-201ENST00000410517 IGKV1D-17A0A075B6S4 117 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IGHV2-26A0A0B4J1V2 119 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ANKRD20A5PA0PJZ0 165 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 EFCAB9A8MZ26 197 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 BUB1B-PAK6H3BSN5 160 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 UBDO15205 165 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 RER1O15258 196 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PIAS1O75925 651 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 BRI3O95415 125 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IFNGP01579 166 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 IGLV1-51P01701 117 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CSN2P05814 226 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CD5P06127 495 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 P0DMU3 169 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM231AP0DMU4 169 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM231CP0DMU5 169 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CTLA4P16410 223 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 GZMHP20718 246 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PSMB8P28062 276 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 POLR2JP52435 117 aaKnown RBP1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 PRKCDQ05655 676 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 KRR1Q13601 381 aaKnown RBP1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 HES1Q14469 280 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 WHAMMP3Q1A5X7 153 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 COQ5Q5HYK3 327 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 TTC32Q5I0X7 151 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 CLEC19AQ6UXS0 136 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM231DQ6ZW35 169 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 RPS27LQ71UM5 84 aaKnown RBP1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 SLC35F6Q8N357 371 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 FAM216BQ8N7L0 139 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ZNF709Q8N972 641 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 ST20-AS1Q8NBB2 130 aa1.52□□□□□ -2.17
RNU6-1140P-201ENST00000410517 OR52L1Q8NGH7 329 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms