RNA–Protein interactions for RNA: ENST00000399598.6

UBXN2B-201, Transcript of UBX domain protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2B, Length 5,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2B-201ENST00000399598 RNF144BQ7Z419 303 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 LHFPL4Q7Z7J7 247 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 PSG8Q9UQ74 426 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 MRPS16Q9Y3D3 137 aaKnown RBP12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 SHANK1Q9Y566 2161 aa12.61□□□□□ -0.39
UBXN2B-201ENST00000399598 PCNX1Q96RV3 2341 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 C5orf24Q7Z6I8 188 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 GGNQ86UU5 652 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 HIST1H2BLQ99880 126 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 CXCL1P09341 107 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 LINC00614P0C842 121 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 FBLN7Q53RD9 439 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 JKAMPQ9P055 326 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 RFNGQ9Y644 331 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 H3BUT2 72 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 COLCA2A8K830 154 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 TIMM23O14925 209 aa12.6□□□□□ -0.39
UBXN2B-201ENST00000399598 RHOGP84095 191 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 ASCL2Q99929 193 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 PLXNA1Q9UIW2 1896 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 TMEM101Q96IK0 257 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 RBBP6Q7Z6E9 1792 aaKnown RBP12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 IGHV1-46P01743 117 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 C19orf67A6NJJ6 358 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 RPP25LQ8N5L8 163 aaKnown RBP12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 LINC01587Q99440 93 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 VKORC1Q9BQB6 163 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 GGTLC1Q9BX51 225 aa12.59□□□□□ -0.39
UBXN2B-201ENST00000399598 UBE2CO00762 179 aa12.58□□□□□ -0.39
UBXN2B-201ENST00000399598 CD7P09564 240 aa12.58□□□□□ -0.39
UBXN2B-201ENST00000399598 HGFACQ04756 655 aa12.58□□□□□ -0.39
UBXN2B-201ENST00000399598 SRRM5B3KS81 715 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 TIMP3P35625 211 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 RNASE6Q93091 150 aaKnown RBP12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 RPUSD1Q9UJJ7 312 aaKnown RBP12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 TAF1LQ8IZX4 1826 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 NUP37Q8NFH4 326 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 SIPA1L1O43166 1804 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 TRBV24-1A0A075B6N3 115 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 COQ2Q96H96 371 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 PATJQ8NI35 1801 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 LRRK1Q38SD2 2015 aa12.58□□□□□ -0.4
UBXN2B-201ENST00000399598 TRAV9-2A0A087WT02 112 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 NTN3O00634 580 aaPredicted RBP12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 TSPAN13O95857 204 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 FAM166AQ6J272 317 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 JMJD8Q96S16 334 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 SLC50A1Q9BRV3 221 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 C2orf88Q9BSF0 95 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 NHP2Q9NX24 153 aaKnown RBP12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 OR10J3Q5JRS4 329 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 SPATA31B1PQ5VZV4 182 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 ARFGEF3Q5TH69 2177 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 IGKV1-5P01602 117 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 HBDP02042 147 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 STAG3L3P0CL85 134 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 DPH3Q96FX2 82 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 PRR31Q5SQ13 230 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 OR5AN1Q8NGI8 311 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 ZNF257Q9Y2Q1 563 aa12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 HEATR1Q9H583 2144 aaKnown RBP12.57□□□□□ -0.4
UBXN2B-201ENST00000399598 CACNG7P62955 275 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 NMSQ5H8A3 153 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 COLCA1Q6ZS62 124 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 GNB1LQ9BYB4 327 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 LINC00527Q9UJ94 153 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 PSMG4Q5JS54 123 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 DERL1Q9BUN8 251 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 TRGV2A0A075B6R0 118 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 IGKV3D-20A0A0C4DH25 116 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 NPIPB5A8MRT5 1133 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 PAX1P15863 534 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
UBXN2B-201ENST00000399598 NYNRINQ9P2P1 1898 aaKnown RBP12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 EVI2AP22794 236 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 OR4X2Q8NGF9 303 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 C5orf30Q96GV9 206 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 LCTP09848 1927 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 FAM90A9PA6NNJ1 464 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 H3BRM9 83 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 AMBPP02760 352 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 GZMBP10144 247 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 PHF3Q92576 2039 aaKnown RBP12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 PNRC2Q9NPJ4 139 aaKnown RBP12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 ZNF581Q9P0T4 197 aa12.55□□□□□ -0.4
UBXN2B-201ENST00000399598 NUDT10Q8NFP7 164 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 AGMATQ9BSE5 352 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 VCX2Q9H322 139 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 TRAV3A0A0B4J244 114 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 MLNRO43193 412 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 IL18BPO95998 194 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 TMEM242Q9NWH2 141 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
UBXN2B-201ENST00000399598 PMS2P5A8MQ11 134 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms