RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 STAG3L2P0CL84 134 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 STAG3L3P0CL85 134 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 C8orf88P0DMB2 117 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 CTSSP25774 331 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 MBNL2Q5VZF2 373 aaKnown RBP7.27□□□□□ -1.25
RTN4-206ENST00000394611 DUX4L9Q6RFH8 374 aaPredicted RBP7.27□□□□□ -1.25
RTN4-206ENST00000394611 C12orf54Q6X4T0 127 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 GGNQ86UU5 652 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 FADS6Q8N9I5 356 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 Q8NFD4 153 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 IGFBPL1Q8WX77 278 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 HSPB8Q9UJY1 196 aa7.27□□□□□ -1.25
RTN4-206ENST00000394611 LOC107984156A0A0G2JMH3 177 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 KLK10O43240 276 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 RPL11P62913 178 aaKnown RBP7.26□□□□□ -1.25
RTN4-206ENST00000394611 TBR1Q16650 682 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 FBXW9Q5XUX1 488 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 ARL17AQ8IVW1 177 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 CIARTQ8N365 385 aaPredicted RBP7.26□□□□□ -1.25
RTN4-206ENST00000394611 C5orf17Q8NAS9 161 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 NUDT10Q8NFP7 164 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 C18orf32Q8TCD1 76 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 ITLN1Q8WWA0 313 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 DYNLRB1Q9NP97 96 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 MGAQ8IWI9 3026 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.26□□□□□ -1.25
RTN4-206ENST00000394611 SMKR1H3BMG3 65 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 HLA-DRB1P01911 266 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 ORM1P02763 201 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 WNT2P09544 360 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 CACNG7P62955 275 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 TIMM23BQ5SRD1 257 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 NUP35Q8NFH5 326 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 ZPBPQ9BS86 351 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 TNFSF15O95150 251 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 GPR183P32249 361 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 ZNF497Q6ZNH5 498 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 AP5S1Q9NUS5 200 aa7.26□□□□□ -1.25
RTN4-206ENST00000394611 NHP2Q9NX24 153 aaKnown RBP7.26□□□□□ -1.25
RTN4-206ENST00000394611 NUP210LQ5VU65 1888 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 KALRNO60229 2985 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 C9orf172C9J069 976 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 IFI6P09912 130 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 CCL3L1P16619 93 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 HSPE1P61604 102 aaKnown RBP7.25□□□□□ -1.25
RTN4-206ENST00000394611 SELENOTP62341 195 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 IL11RAQ14626 422 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 DNLZQ5SXM8 178 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 EBLN2Q6P2I7 272 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 CLEC2AQ6UVW9 174 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 TEX43Q6ZNM6 134 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 ZFHX4Q86UP3 3567 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 GGTLC3B5MD39 225 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 IGKV1-16P04430 117 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 SLC25A53Q5H9E4 307 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 IGFL4Q6B9Z1 124 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 EXOC3-AS1Q8N2X6 119 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 DECR2Q9NUI1 292 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 CALYQ9NYX4 217 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 TP53TG3Q9ULZ0 132 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 IGHV3-66A0A0C4DH42 116 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 NDUFB8O95169 186 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 CSN1S1P47710 185 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 WDR86Q86TI4 376 aa7.25□□□□□ -1.25
RTN4-206ENST00000394611 CACNA1AO00555 2505 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 SAA2-SAA4A0A096LPE2 208 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 FAM231BA6NCW3 169 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 FAM90A26D6RGX4 464 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 CRYABP02511 175 aaKnown RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 SAA2P0DJI9 122 aaPredicted RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 EVI2AP22794 236 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 MORN5Q5VZ52 161 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 TMEM42Q69YG0 159 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 ZNF418Q8TF45 676 aaPredicted RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 SSC4DQ8WTU2 575 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 COQ2Q96H96 371 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 LAMA5O15230 3695 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 FAM208BQ5VWN6 2430 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 PEX7O00628 323 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 HBBP68871 147 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 UTF1Q5T230 341 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 TMEM136Q6ZRR5 245 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 ADTRPQ96IZ2 230 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 PEF1Q9UBV8 284 aaKnown RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 DMXL2Q8TDJ6 3036 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 ANKHD1Q8IWZ3 2542 aaKnown RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 PTPRQQ9UMZ3 2332 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 A8MWL6 223 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 DUTP33316 252 aaKnown RBP7.24□□□□□ -1.25
RTN4-206ENST00000394611 GUSBP1Q15486 140 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 PNKDQ8N490 385 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 SCNM1Q9BWG6 230 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 CXXC4Q9H2H0 198 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 TMEM160Q9NX00 188 aa7.24□□□□□ -1.25
RTN4-206ENST00000394611 K7ERJ3 54 aa7.23□□□□□ -1.25
RTN4-206ENST00000394611 FABP2P12104 132 aa7.23□□□□□ -1.25
RTN4-206ENST00000394611 LOXL3P58215 753 aa7.23□□□□□ -1.25
RTN4-206ENST00000394611 TWIST1Q15672 202 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms