RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 CTDSP2O14595 271 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 GNG7O60262 68 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 EIF4EBP3O60516 100 aaPredicted RBP8.4□□□□□ -1.06
SOD1-202ENST00000389995 MT-CO2P00403 227 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 HTN3P15516 51 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 RPL5P46777 297 aaKnown RBP8.4□□□□□ -1.06
SOD1-202ENST00000389995 UCP3P55916 312 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 TMEM41BQ5BJD5 291 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 THOC7Q6I9Y2 204 aaKnown RBP8.4□□□□□ -1.06
SOD1-202ENST00000389995 HSD17B13Q7Z5P4 300 aaPredicted RBP8.4□□□□□ -1.06
SOD1-202ENST00000389995 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 MTFP1Q9UDX5 166 aa8.4□□□□□ -1.06
SOD1-202ENST00000389995 PUS1Q9Y606 427 aaKnown RBP eCLIP8.4□□□□□ -1.06
SOD1-202ENST00000389995 FLG2Q5D862 2391 aaPredicted RBP8.39□□□□□ -1.07
SOD1-202ENST00000389995 TRAV2A0A0B4J234 112 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 A0A1B0GU03 582 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 GABARAPH6UMI1 98 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 TBPP20226 339 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 PPP5CP53041 499 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 TAS2R19P59542 299 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 MRPS10P82664 201 aaKnown RBP8.39□□□□□ -1.07
SOD1-202ENST00000389995 IL18Q14116 193 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 SCGB2B2Q4G0G5 96 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 ARRDC1Q8N5I2 433 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 OR1P1Q8NH06 330 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 DIRAS2Q96HU8 199 aa8.39□□□□□ -1.07
SOD1-202ENST00000389995 CCDC59Q9P031 241 aaKnown RBP8.39□□□□□ -1.07
SOD1-202ENST00000389995 RAB3DO95716 219 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 FGF2P09038 288 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 PI3P19957 117 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 STEAP1BQ6NZ63 245 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 H2BFWTQ7Z2G1 175 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 TMEM229BQ8NBD8 167 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 DYNC2LI1Q8TCX1 351 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 ZNF486Q96H40 463 aaPredicted RBP8.38□□□□□ -1.07
SOD1-202ENST00000389995 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 TSC22D3Q99576 134 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 FKBP11Q9NYL4 201 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 PRNDQ9UKY0 176 aa8.38□□□□□ -1.07
SOD1-202ENST00000389995 CCDC160A6NGH7 325 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 H3BMQ9 156 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 CD5P06127 495 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 SPART-AS1P0CW21 52 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 PIGPP57054 158 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 FXYD7P58549 80 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 RNF212Q495C1 297 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 SPINK9Q5DT21 86 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 PSMG4Q5JS54 123 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 SPATA12Q7Z6I5 190 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 LHFPL1Q86WI0 220 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 OR4A16Q8NH70 328 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 ZFAND1Q8TCF1 268 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 DCANP1Q8TF63 244 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 MRGPRFQ96AM1 343 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 TMEM56Q96MV1 263 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 TXN2Q99757 166 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 FAM212BQ9NTI7 297 aaPredicted RBP8.37□□□□□ -1.07
SOD1-202ENST00000389995 COPZ2Q9P299 210 aa8.37□□□□□ -1.07
SOD1-202ENST00000389995 IGHV3OR16-12A0A075B7B8 117 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 P2RY1P47900 373 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 RND3P61587 244 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 SSBP1Q04837 148 aaKnown RBP8.36□□□□□ -1.07
SOD1-202ENST00000389995 MEF2DQ14814 521 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 FAAP20Q6NZ36 180 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 TMEM88Q6PEY1 159 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 ZNF600Q6ZNG1 722 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 CADM3Q8N126 398 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 CCDC71LQ8N9Z2 235 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 TERB2Q8NHR7 220 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 SMIM4Q8WVI0 70 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 GRAMD2BQ96HH9 432 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 SEC22AQ96IW7 307 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 RABL2AQ9UBK7 228 aaPredicted RBP8.36□□□□□ -1.07
SOD1-202ENST00000389995 RABL2BQ9UNT1 228 aa8.36□□□□□ -1.07
SOD1-202ENST00000389995 C3orf85A0A1B0GTC6 90 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 DISC1C4P0D8 188 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 CTDSPLO15194 276 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 ATG12O94817 140 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 IGKV1-39P01597 117 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 IGKV1D-39P04432 117 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 AKAIN1P0CW23 69 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 NPPCP23582 126 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 AKR1C2P52895 323 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 DEFB1P60022 68 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 DHRS2Q13268 280 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 TRIM16LQ309B1 348 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 FAM222AQ5U5X8 452 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 OR13C8Q8NGS7 320 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 RNASE11Q8TAA1 199 aaKnown RBP8.35□□□□□ -1.07
SOD1-202ENST00000389995 MARCH1Q8TCQ1 289 aa8.35□□□□□ -1.07
SOD1-202ENST00000389995 MRPL36Q9P0J6 103 aaKnown RBP8.35□□□□□ -1.07
SOD1-202ENST00000389995 RSL24D1Q9UHA3 163 aaKnown RBP8.35□□□□□ -1.07
SOD1-202ENST00000389995 C14orf166Q9Y224 244 aaKnown RBP8.35□□□□□ -1.07
SOD1-202ENST00000389995 HELTA6NFD8 242 aa8.34□□□□□ -1.07
SOD1-202ENST00000389995 FABP12A6NFH5 140 aa8.34□□□□□ -1.07
SOD1-202ENST00000389995 TMEM50AO95807 157 aa8.34□□□□□ -1.07
SOD1-202ENST00000389995 IGKV3-20P01619 116 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms