RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CBX5P45973 191 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 CCL18P55774 89 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 RRN3P1Q2M238 152 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 LYPD1Q8N2G4 141 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 SLC35G3Q8N808 338 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 C7orf50Q9BRJ6 194 aaKnown RBP12.11□□□□□ -0.47
HMGN1-203ENST00000380748 SAV1Q9H4B6 383 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-203ENST00000380748 IFT46Q9NQC8 304 aa12.11□□□□□ -0.47
HMGN1-203ENST00000380748 FAM212BQ9NTI7 297 aaPredicted RBP12.11□□□□□ -0.47
HMGN1-203ENST00000380748 BTF3P20290 206 aaKnown RBP12.1□□□□□ -0.47
HMGN1-203ENST00000380748 ALDH3B2P48448 385 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 DLK1P80370 383 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 USF2Q15853 346 aaPredicted RBP12.1□□□□□ -0.47
HMGN1-203ENST00000380748 SIGLEC15Q6ZMC9 328 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 TBC1D26Q86UD7 250 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 OR4B1Q8NGF8 309 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 C18orf15Q96N68 181 aa12.1□□□□□ -0.47
HMGN1-203ENST00000380748 TXNL4BQ9NX01 149 aaKnown RBP12.1□□□□□ -0.47
HMGN1-203ENST00000380748 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
HMGN1-203ENST00000380748 HOXA1P49639 335 aaPredicted RBP12.09□□□□□ -0.47
HMGN1-203ENST00000380748 XGP55808 180 aa12.09□□□□□ -0.47
HMGN1-203ENST00000380748 DHODHQ02127 395 aa12.09□□□□□ -0.47
HMGN1-203ENST00000380748 VCXQ9H320 206 aa12.09□□□□□ -0.47
HMGN1-203ENST00000380748 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 A0A0A6YYH2 397 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 A6NJ64 397 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 F5H768 121 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 BUB3O43684 328 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 IGLC1P0CG04 106 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1-203ENST00000380748 SUB1P53999 127 aaKnown RBP eCLIP12.08□□□□□ -0.48
HMGN1-203ENST00000380748 FOXI2Q6ZQN5 318 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 SSX7Q7RTT5 188 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 Q8WTZ3 238 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 LINC00052Q96N35 136 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 CLUHP3Q96NS8 147 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 Q9H8V8 135 aa12.08□□□□□ -0.48
HMGN1-203ENST00000380748 A0A0B4J293 547 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 PRM2P04554 102 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 IL4P05112 153 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 DEFB130BP0DP73 79 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 DEFB130AP0DP74 79 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 ETV6P41212 452 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 RPL5P46777 297 aaKnown RBP12.07□□□□□ -0.48
HMGN1-203ENST00000380748 ZNF79Q15937 498 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 OR5H2Q8NGV7 314 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 FRZBQ92765 325 aa12.07□□□□□ -0.48
HMGN1-203ENST00000380748 WDR12Q9GZL7 423 aaKnown RBP12.07□□□□□ -0.48
HMGN1-203ENST00000380748 F6UB75 175 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 IGKV1-5P01602 117 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 CLEC2LP0C7M8 214 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 RORCP51449 518 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 PSG9Q00887 426 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 OR1S2Q8NGQ3 325 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 MAGT1Q9H0U3 335 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 SCPEP1Q9HB40 452 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 DIABLOQ9NR28 239 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 ANAPC10Q9UM13 185 aa12.06□□□□□ -0.48
HMGN1-203ENST00000380748 P0C879 139 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 S100GP29377 79 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 OR10J1P30954 320 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 SDC2P34741 201 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 RND2P52198 227 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 AQP4P55087 323 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 SCAND1P57086 179 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 TAS2R46P59540 309 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 YPEL3P61236 119 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-203ENST00000380748 MXD1Q05195 221 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 CLINT1Q14677 625 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 Q9H3A6 140 aa12.05□□□□□ -0.48
HMGN1-203ENST00000380748 LYRM9A8MSI8 78 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 ZNF705GA8MUZ8 300 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-203ENST00000380748 TAS2R20P59543 309 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 FCN2Q15485 313 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 BSXQ3C1V8 233 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 IDNKQ5T6J7 187 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 FAM78BQ5VT40 261 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 PRSS54Q6PEW0 395 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 COQ8AQ8NI60 647 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 TMEM208Q9BTX3 173 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 HMCN2Q8NDA2 5059 aa12.04□□□□□ -0.48
HMGN1-203ENST00000380748 M0QYG6 137 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 GSTZ1O43708 216 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-203ENST00000380748 NAT1P18440 290 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 HRH1P35367 487 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 PDCD10Q9BUL8 212 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 ENY2Q9NPA8 101 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
HMGN1-203ENST00000380748 SOCS3O14543 225 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 HSPA13P48723 471 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 PSMB3P49720 205 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 PAX9P55771 341 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 LPCAT3Q6P1A2 487 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 UHRF2Q96PU4 802 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 KLK11Q9UBX7 282 aa12.02□□□□□ -0.49
HMGN1-203ENST00000380748 A0A0J9YX75 114 aa12.01□□□□□ -0.49
HMGN1-203ENST00000380748 NXPH3O95157 252 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms