RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 GTSCR1Q86UQ5 136 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 CST9LQ9H4G1 147 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 APOBEC3AP31941 199 aaPredicted RBP14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 SIGLEC12Q96PQ1 595 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 PGPEP1Q9NXJ5 209 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV2-5P01817 119 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 SCN8AQ9UQD0 1980 aa14.18□□□□□ -0.14
COL4A3BP-203ENST00000380494 SFTA2Q6UW10 78 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 D6R8Y8 96 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 COL11A2P13942 1736 aaPredicted RBP14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 KLF2Q9Y5W3 355 aaPredicted RBP14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 HGFACQ04756 655 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 SPSB3Q6PJ21 355 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 JMJD8Q96S16 334 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV3-66A0A0C4DH42 116 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV1-12A0A0C4DH73 117 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 NBR2O15453 112 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 FOXH1O75593 365 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 TIAF1O95411 115 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV1D-12P01611 117 aa14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 SPAG8Q99932 426 aaPredicted RBP14.17□□□□□ -0.14
COL4A3BP-203ENST00000380494 FNDC10F2Z333 226 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 SMAD7O15105 426 aaKnown RBP14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 EFEMP2O95967 443 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 TMEM155Q4W5P6 130 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 SPATA31B1PQ5VZV4 182 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 FLVCR1-AS1Q8TAF5 88 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGLV3-12A0A075B6K2 115 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 TDGF1P13385 188 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 SPINK8P0C7L1 97 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 PLEKHB2Q96CS7 222 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 CKAP5Q14008 2032 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 EVI2AP22794 236 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 SPANXDQ9BXN6 97 aa14.16□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV1-2P23083 117 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 ADAMTSL5Q6ZMM2 481 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 MMP23AO75900 390 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGKV1-5P01602 117 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 LCN12Q6JVE5 192 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 PRR7Q8TB68 274 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 IGHV3-35A0A0C4DH35 117 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 UCNP55089 124 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 DUX3Q96PT4 197 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 TMEM249Q2WGJ8 235 aa14.15□□□□□ -0.14
COL4A3BP-203ENST00000380494 TRAV12-3A0A0B4J271 114 aa14.15□□□□□ -0.15
COL4A3BP-203ENST00000380494 TCRAP04437 139 aa14.15□□□□□ -0.15
COL4A3BP-203ENST00000380494 C9orf172C9J069 976 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 LHX2P50458 406 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 OVOL2Q9BRP0 275 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 OTOFQ9HC10 1997 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGHV3OR16-13A0A075B7E8 117 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGHV3-74A0A0B4J1X5 117 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 CLEC19AQ6UXS0 136 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 TNFRSF14Q92956 283 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 TRGV9Q99603 122 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 MESP1Q9BRJ9 268 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 NRXN2Q9P2S2 1712 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 PRTN3P24158 256 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 SEPSECSQ9HD40 501 aaKnown RBP14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 PSME4Q14997 1843 aa14.14□□□□□ -0.15
COL4A3BP-203ENST00000380494 SLC25A20O43772 301 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 S4R3C0 116 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 CNTRLQ7Z7A1 2325 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 NKX2-8O15522 239 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 MORN3Q6PF18 240 aaPredicted RBP14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 IMMP1LQ96LU5 166 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 CHAC1Q9BUX1 264 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 GGTLC3B5MD39 225 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 PFN1P07737 140 aaKnown RBP14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 NPSP0C0P6 89 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 NAA38Q9BRA0 125 aaKnown RBP14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 OVOL1O14753 267 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 LGALS1P09382 135 aaKnown RBP14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 CD28P10747 220 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 S100A7L2Q5SY68 101 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 CFAP161Q6P656 301 aa14.13□□□□□ -0.15
COL4A3BP-203ENST00000380494 CD300EQ496F6 205 aaPredicted RBP14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 NYNRINQ9P2P1 1898 aaKnown RBP14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 PDLIM4P50479 330 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 NABP1Q96AH0 204 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 ZNF48Q96MX3 618 aaPredicted RBP14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 DMRTA2Q96SC8 542 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGKV1-27A0A075B6S5 117 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGKV3-20P01619 116 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 CELA3AP09093 270 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 CITED1Q99966 193 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 IGLV3-19P01714 112 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 ZIC4Q8N9L1 334 aa14.12□□□□□ -0.15
COL4A3BP-203ENST00000380494 TNFRSF6BO95407 300 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 LYZL1Q6UWQ5 148 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 LYPD1Q8N2G4 141 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 TMEM133Q9H2Q1 129 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 TRGV11A0A075B6L2 103 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 C9JQL5 133 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 TOMM40O96008 361 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 CD7P09564 240 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 LY6EQ16553 131 aa14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 DMRTC2Q8IXT2 367 aaPredicted RBP14.11□□□□□ -0.15
COL4A3BP-203ENST00000380494 NEU4Q8WWR8 484 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 207.8 ms