RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PSG7Q13046 419 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GAGE4Q13068 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 CITED2Q99967 270 aaPredicted RBP12.72□□□□□ -0.37
FXN-201ENST00000377270 TPPP3Q9BW30 176 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 F8W1H4 67 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 CEACAM4O75871 244 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 SLC35E4Q6ICL7 350 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 RNASEKQ6P5S7 137 aaKnown RBP12.72□□□□□ -0.37
FXN-201ENST00000377270 LINC00596Q86U02 117 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 GCSAMQ8N6F7 178 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 DEFB124Q8NES8 71 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 OCC1Q8TAD7 63 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 ESPL1Q14674 2120 aa12.72□□□□□ -0.37
FXN-201ENST00000377270 TRGV10A0A0A0MS01 117 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 LYZL6O75951 148 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 IGKV1-5P01602 117 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 COX8AP10176 69 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 SLC35B1P78383 322 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 FDCSPQ8NFU4 85 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 TMEM147Q9BVK8 224 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 DLL3Q9NYJ7 618 aa12.71□□□□□ -0.37
FXN-201ENST00000377270 WISP2O76076 250 aa12.71□□□□□ -0.38
FXN-201ENST00000377270 IGHV1-2P23083 117 aa12.71□□□□□ -0.38
FXN-201ENST00000377270 TRIB1Q96RU8 372 aa12.71□□□□□ -0.38
FXN-201ENST00000377270 TMEM191AQ9H0A3 160 aa12.71□□□□□ -0.38
FXN-201ENST00000377270 MS4A6AQ9H2W1 248 aa12.71□□□□□ -0.38
FXN-201ENST00000377270 SYS1-DBNDD2H3BUS1 97 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 J3QT63 122 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 TIMM23BQ5SRD1 257 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 PCSK4Q6UW60 755 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 PIP4P1Q86T03 277 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 RTL8AQ9BWD3 113 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 ASPMQ8IZT6 3477 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 IGHV3-64DA0A0J9YX35 117 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 CRXO43186 299 aaPredicted RBP12.7□□□□□ -0.38
FXN-201ENST00000377270 DEFA4P12838 97 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 PMCHL2Q9BQD1 86 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 NPCDR1Q9BY65 106 aa12.7□□□□□ -0.38
FXN-201ENST00000377270 hADV38S2A0JD32 116 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 WDR86Q86TI4 376 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 OR2W1Q9Y3N9 320 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 MGST1P10620 155 aaKnown RBP12.69□□□□□ -0.38
FXN-201ENST00000377270 TFF3Q07654 80 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 KLRD1Q13241 179 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 CR1LQ2VPA4 569 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 LINC00173Q6ZV60 143 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 CNEP1R1Q8N9A8 125 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 C1orf162Q8NEQ5 155 aaPredicted RBP12.69□□□□□ -0.38
FXN-201ENST00000377270 IL1F10Q8WWZ1 152 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 C1RLQ9NZP8 487 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 RABAC1Q9UI14 185 aa12.69□□□□□ -0.38
FXN-201ENST00000377270 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 APCSP02743 223 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 Q6P435 159 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 NRGNQ92686 78 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 MCRIP2Q9BUT9 160 aaKnown RBP12.68□□□□□ -0.38
FXN-201ENST00000377270 FAM90A26D6RGX4 464 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
FXN-201ENST00000377270 PDLIM3Q53GG5 364 aaPredicted RBP12.68□□□□□ -0.38
FXN-201ENST00000377270 ZFAND6Q6FIF0 208 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 FAM214BQ7L5A3 538 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 OR1L1Q8NH94 360 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 TNFRSF19Q9NS68 423 aa12.68□□□□□ -0.38
FXN-201ENST00000377270 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 IGHV3-7P01780 117 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 IGHG3P01860 377 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 WT1P19544 449 aaPredicted RBP12.67□□□□□ -0.38
FXN-201ENST00000377270 SRSF1Q07955 248 aaKnown RBP eCLIP12.67□□□□□ -0.38
FXN-201ENST00000377270 ZNF146Q15072 292 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.67□□□□□ -0.38
FXN-201ENST00000377270 C18orf15Q96N68 181 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 OR1A1Q9P1Q5 309 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 KCNS2Q9ULS6 477 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 A0A1W2PRD5 423 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 A0A1W2PRF3 423 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 A0A1W2PRM7 423 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 SH2D7A6NKC9 451 aaPredicted RBP12.67□□□□□ -0.38
FXN-201ENST00000377270 K7EN84 100 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 HLA-DQA1P01909 254 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 TXNDC17Q9BRA2 123 aa12.67□□□□□ -0.38
FXN-201ENST00000377270 TECRQ9NZ01 308 aaKnown RBP12.67□□□□□ -0.38
FXN-201ENST00000377270 PRSS29PA6NIE9 313 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 OR2H2O95918 312 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 GRPP07492 148 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 CX3CL1P78423 397 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 FAM120AOSQ5T036 256 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 Q6AWC8 147 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 ONECUT1Q9UBC0 465 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 POLDIP2Q9Y2S7 368 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 FOXH1O75593 365 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 Q6ZT83 130 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 ZFHX4Q86UP3 3567 aa12.66□□□□□ -0.38
FXN-201ENST00000377270 AMY1AP04745 511 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 FHL3Q13643 280 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 DIAPH2-AS1Q14236 149 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 TEX29Q8N6K0 151 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 UBALD1Q8TB05 177 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 CNOT1A5YKK6 2376 aaKnown RBP12.65□□□□□ -0.38
FXN-201ENST00000377270 SCO2A0A1W2PP80 73 aa12.65□□□□□ -0.38
FXN-201ENST00000377270 A0A1W2PRE2 83 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms