RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 METTL26Q96S19 204 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 MCUBQ9NWR8 336 aa15.44■□□□□ 0.06
VSX1-201ENST00000376707 MLANAQ16655 118 aa15.43■□□□□ 0.06
VSX1-201ENST00000376707 C2orf83Q53S99 150 aa15.43■□□□□ 0.06
VSX1-201ENST00000376707 NMSQ5H8A3 153 aa15.43■□□□□ 0.06
VSX1-201ENST00000376707 NARS2Q96I59 477 aaKnown RBP15.43■□□□□ 0.06
VSX1-201ENST00000376707 HEYLQ9NQ87 328 aaPredicted RBP15.43■□□□□ 0.06
VSX1-201ENST00000376707 RPS10-NUDT3A0A1W2PQS6 291 aa15.42■□□□□ 0.06
VSX1-201ENST00000376707 SUPT4H1P63272 117 aaKnown RBP15.42■□□□□ 0.06
VSX1-201ENST00000376707 FAM24BQ8N5W8 94 aa15.42■□□□□ 0.06
VSX1-201ENST00000376707 RNASEH2CQ8TDP1 164 aaKnown RBP15.42■□□□□ 0.06
VSX1-201ENST00000376707 TRIM63Q969Q1 353 aa15.42■□□□□ 0.06
VSX1-201ENST00000376707 TRAV30A0A087WSZ9 112 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 A0A0B4J2A0 478 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 IGKV1-17P01599 117 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 SULT1A3P0DMM9 295 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 SULT1A4P0DMN0 295 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 KLF9Q13886 244 aaPredicted RBP15.41■□□□□ 0.06
VSX1-201ENST00000376707 STHQ8IWL8 128 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 SLC24A4Q8NFF2 622 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 STXBP6Q8NFX7 210 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 TMEM170AQ8WVE7 144 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 MFFQ9GZY8 342 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 C11orf68Q9H3H3 251 aaKnown RBP15.41■□□□□ 0.06
VSX1-201ENST00000376707 SHPKQ9UHJ6 478 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 V9GYH0 126 aa15.41■□□□□ 0.06
VSX1-201ENST00000376707 CEBPZOSA8MTT3 80 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 SLC25A4P12235 298 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 CRYBB3P26998 211 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 P2RY1P47900 373 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 TIGITQ495A1 244 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 PRSS54Q6PEW0 395 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 C11orf45Q8TAV5 145 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 GRAMD2BQ96HH9 432 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 PRR13Q9NZ81 148 aa15.4■□□□□ 0.06
VSX1-201ENST00000376707 AKR1C4P17516 323 aa15.39■□□□□ 0.05
VSX1-201ENST00000376707 FAUP35544 74 aaKnown RBP15.39■□□□□ 0.05
VSX1-201ENST00000376707 CCR6P51684 374 aa15.39■□□□□ 0.05
VSX1-201ENST00000376707 AP3S2P59780 193 aa15.39■□□□□ 0.05
VSX1-201ENST00000376707 NANOS2P60321 138 aaKnown RBP15.39■□□□□ 0.05
VSX1-201ENST00000376707 SRPXP78539 464 aa15.39■□□□□ 0.05
VSX1-201ENST00000376707 RBMS2Q15434 407 aaKnown RBP15.39■□□□□ 0.05
VSX1-201ENST00000376707 FBXL17Q9UF56 701 aa15.39■□□□□ 0.05
VSX1-201ENST00000376707 K7EQG2 157 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 IGLC1P0CG04 106 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 ANXA3P12429 323 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 LYZL2Q7Z4W2 148 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 NOXA1Q86UR1 476 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 OR1S2Q8NGQ3 325 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 DEDD2Q8WXF8 326 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 RBM38Q9H0Z9 239 aaKnown RBP15.38■□□□□ 0.05
VSX1-201ENST00000376707 HSPB7Q9UBY9 170 aa15.38■□□□□ 0.05
VSX1-201ENST00000376707 PIGBOS1A0A0B4J2F0 54 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 DEFB4AO15263 64 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 IFNA4P05014 189 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 ZNF688P0C7X2 276 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 NPY1RP25929 384 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 EIF2B2P49770 351 aaKnown RBP15.37■□□□□ 0.05
VSX1-201ENST00000376707 RND2P52198 227 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 SMCO1Q147U7 214 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 ZNF79Q15937 498 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 PYDC2Q56P42 97 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 ETFRF1Q6IPR1 90 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 LGI3Q8N145 548 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 Q8WTZ3 238 aa15.37■□□□□ 0.05
VSX1-201ENST00000376707 NXPH3O95157 252 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 OR10J1P30954 320 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 S100A5P33763 92 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 YPEL3P61236 119 aaPredicted RBP15.36■□□□□ 0.05
VSX1-201ENST00000376707 CCDC190Q86UF4 302 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 TOMM5Q8N4H5 51 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 U3KQ87 197 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 U3KQE9 123 aa15.36■□□□□ 0.05
VSX1-201ENST00000376707 HELTA6NFD8 242 aa15.35■□□□□ 0.05
VSX1-201ENST00000376707 CCDC160A6NGH7 325 aa15.35■□□□□ 0.05
VSX1-201ENST00000376707 ZNF701M0R085 212 aaPredicted RBP15.35■□□□□ 0.05
VSX1-201ENST00000376707 TMEM128Q5BJH2 165 aa15.35■□□□□ 0.05
VSX1-201ENST00000376707 TRPT1Q86TN4 253 aaKnown RBP15.35■□□□□ 0.05
VSX1-201ENST00000376707 DUXBA0A1W2PPF3 345 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 HNRNPCP07910 306 aaKnown RBP eCLIP15.34■□□□□ 0.05
VSX1-201ENST00000376707 SPP1P10451 314 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 ATP5IP56385 69 aaPredicted RBP15.34■□□□□ 0.05
VSX1-201ENST00000376707 DHRS2Q13268 280 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 TMEM41BQ5BJD5 291 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 LGALS9CQ6DKI2 356 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 MORN3Q6PF18 240 aaPredicted RBP15.34■□□□□ 0.05
VSX1-201ENST00000376707 DTD1Q8TEA8 209 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 DCANP1Q8TF63 244 aa15.34■□□□□ 0.05
VSX1-201ENST00000376707 SLC25A21Q9BQT8 299 aaPredicted RBP15.34■□□□□ 0.05
VSX1-201ENST00000376707 KNCNA6PVL3 124 aa15.33■□□□□ 0.04
VSX1-201ENST00000376707 AP2S1P53680 142 aaPredicted RBP15.33■□□□□ 0.04
VSX1-201ENST00000376707 TMED4Q7Z7H5 227 aa15.33■□□□□ 0.04
VSX1-201ENST00000376707 RPP25LQ8N5L8 163 aaKnown RBP15.33■□□□□ 0.04
VSX1-201ENST00000376707 LRTM2Q8N967 370 aa15.33■□□□□ 0.04
VSX1-201ENST00000376707 RBKSQ9H477 322 aa15.33■□□□□ 0.04
VSX1-201ENST00000376707 PITX3O75364 302 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 IFNA10P01566 189 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 IL4P05112 153 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 ACTL10Q5JWF8 245 aa15.32■□□□□ 0.04
VSX1-201ENST00000376707 C16orf54Q6UWD8 224 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms