RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 IGHV3-35A0A0C4DH35 117 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 SVILO95425 2214 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 CEACAM4O75871 244 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 A0A0G2JLM5 398 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 F2Z2F3 143 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 TRGV3P03979 118 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 CACNG7P62955 275 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 SPATA31B1PQ5VZV4 182 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 SRSF1Q07955 248 aaKnown RBP eCLIP17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 TMPRSS3P57727 454 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 IFI27L1Q96BM0 104 aa17.5■□□□□ 0.39
TGFBR1-202ENST00000374994 C9orf172C9J069 976 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 PFN1P07737 140 aaKnown RBP17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 Q0VG73 95 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 C20orf144Q9BQM9 153 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 TMEM50AO95807 157 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 ORMDL2Q53FV1 153 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 TMEM167AQ8TBQ9 72 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 SCN8AQ9UQD0 1980 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 GFRA3O60609 400 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 FREM3P0C091 2139 aa17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 FOXG1P55316 489 aaPredicted RBP17.49■□□□□ 0.39
TGFBR1-202ENST00000374994 C15orf62A8K5M9 175 aa17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 C3orf79P0CE67 100 aa17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 LDLRAD2Q5SZI1 272 aa17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 A8MWP6 167 aa17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 CA1P00915 261 aaPredicted RBP17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 TRGV9Q99603 122 aa17.48■□□□□ 0.39
TGFBR1-202ENST00000374994 A0A0G2JRQ6 117 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 PDLIM4P50479 330 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 ERVK11-1P61568 191 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 MEIG1Q5JSS6 88 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 A6NNC1 897 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 IGHV2-5P01817 119 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 COQ2Q96H96 371 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 Q6ZRM9 215 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 RNF5Q99942 180 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 NHP2Q9NX24 153 aaKnown RBP17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 TCRAP04437 139 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 TYMSP04818 313 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 RLFQ13129 1914 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 ARL6IP6Q8N6S5 226 aa17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 COLQQ9Y215 455 aaPredicted RBP17.47■□□□□ 0.39
TGFBR1-202ENST00000374994 CEP290O15078 2479 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 TRAV5A0A0B4J249 113 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 NDUFS6O75380 124 aaKnown RBP17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 SPRR3Q9UBC9 169 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 MUC21A0A0G2JKD1 596 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 MUC21A0A140T8X8 626 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 TDGF1P3P51864 188 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 MUC21Q5SSG8 566 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 IGHV3OR16-13A0A075B7E8 117 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 IGHV3-74A0A0B4J1X5 117 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 SCGB1A1P11684 91 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 B3GALT5-AS1P59052 145 aa17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 FNDC4Q9H6D8 234 aaPredicted RBP17.46■□□□□ 0.39
TGFBR1-202ENST00000374994 NTF4P34130 210 aa17.46■□□□□ 0.38
TGFBR1-202ENST00000374994 EMP1P54849 157 aa17.46■□□□□ 0.38
TGFBR1-202ENST00000374994 PLSCR4Q9NRQ2 329 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 ITGB1BP1O14713 200 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 IGKCP01834 107 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 RRN3P1Q2M238 152 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 IGHV2-70P01814 119 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 IL18BPO95998 194 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 CSRP2Q16527 193 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 ZNF418Q8TF45 676 aaPredicted RBP17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 S4R3C0 116 aa17.45■□□□□ 0.38
TGFBR1-202ENST00000374994 NPFFO15130 113 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 IGHV1-46P01743 117 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 ZNF585BQ52M93 769 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 COLCA1Q6ZS62 124 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 LINC00473A8K010 186 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 TFF1P04155 84 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 CD177Q8N6Q3 437 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 BEX4Q9NWD9 120 aaPredicted RBP17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 TNFRSF18Q9Y5U5 241 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 H3BRM9 83 aa17.44■□□□□ 0.38
TGFBR1-202ENST00000374994 IGHV3-23P01764 117 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 MBNL3Q9NUK0 354 aaKnown RBP17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 OR10W1Q8NGF6 305 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 NDUFA3O95167 84 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 ZNF581Q9P0T4 197 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 IGKV3-15P01624 115 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 RPRMLQ8N4K4 120 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 MEGF9Q9H1U4 602 aa17.43■□□□□ 0.38
TGFBR1-202ENST00000374994 DNAL4O96015 105 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 UBE2V1Q13404 147 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 NUP35Q8NFH5 326 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 LINC01560Q8TB33 94 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 MOB4Q9Y3A3 225 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 CYSLTR1Q9Y271 337 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 TRAV21A0A0B4J279 112 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 APOMO95445 188 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 LYPD1Q8N2G4 141 aa17.42■□□□□ 0.38
TGFBR1-202ENST00000374994 ZNF479Q96JC4 524 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 CLEC19AQ6UXS0 136 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 DUX5Q96PT3 197 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 A0A1B0GWJ7 208 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 TMEM262E9PQX1 116 aa17.41■□□□□ 0.38
TGFBR1-202ENST00000374994 FAM169BQ8N8A8 192 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms