RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 LEMD1Q68G75 181 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 TCEAL7Q9BRU2 100 aa12.77□□□□□ -0.37
CNKSR1-202ENST00000374253 SPG11Q96JI7 2443 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 TEX22C9J3V5 150 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 NDUFS6O75380 124 aaKnown RBP12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 FRMD6-AS1P0C7T7 363 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 SRSF12Q8WXF0 261 aaKnown RBP12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 SSBP3Q9BWW4 388 aaPredicted RBP12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 LOC105371242A0A075B767 164 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 SPINK4O60575 86 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 CNIH1O95406 144 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 GNG4P50150 75 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 FXYD3Q14802 87 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 CRYBG3Q68DQ2 2970 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 LY6G5BQ8NDX9 201 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 BLNKQ8WV28 456 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 C11orf52Q96A22 123 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 S4R3C0 116 aa12.76□□□□□ -0.37
CNKSR1-202ENST00000374253 A0A1B0GUS0 222 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 LY6LH3BQJ8 138 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 PRB4P10163 310 aaPredicted RBP12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 HTR1DP28221 377 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 ERVFC1-1P60608 527 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 HES1Q14469 280 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 SSX2Q16385 188 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 C8orf46Q8TAG6 207 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 TPTE2P1Q5T6R2 138 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 PAXXQ9BUH6 204 aa12.75□□□□□ -0.37
CNKSR1-202ENST00000374253 TRAV34A0A0B4J273 112 aa12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 TGOLN2O43493 480 aa12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 MGST1P10620 155 aaKnown RBP12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 KLF17Q5JT82 389 aaPredicted RBP12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 THAP8Q8NA92 274 aa12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 GSN-AS1Q9NRJ2 163 aa12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 AMMECR1Q9Y4X0 333 aaPredicted RBP12.74□□□□□ -0.37
CNKSR1-202ENST00000374253 C19orf84I3L1E1 186 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 CD99P14209 185 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 ZFP36P26651 326 aaKnown RBP12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 SLC35B1P78383 322 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 C19orf24Q9BVV8 132 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 FABP1P07148 127 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 GNLYP22749 145 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 RANP62826 216 aaKnown RBP12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 GNG5P63218 68 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 IMMP2LQ96T52 175 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 MRPL32Q9BYC8 188 aaKnown RBP12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 RPH3ALQ9UNE2 315 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
CNKSR1-202ENST00000374253 TCL1AP56279 114 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 BPIFB3P59826 476 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 LCN2P80188 198 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 DYNAPQ8N1N2 210 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 PFDN5Q99471 154 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 HIST1H2BLQ99880 126 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 OR51M1Q9H341 326 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 CHODLQ9H9P2 273 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 DPM3Q9P2X0 92 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 F11RQ9Y624 299 aaKnown RBP12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 ACACBO00763 2458 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 CELSR2Q9HCU4 2923 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 FSTL3O95633 263 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 CBLN1P23435 193 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 UNQ6494/PRO21346Q6UXR6 183 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 OR1L4Q8NGR5 311 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 OR1P1Q8NH06 330 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 WNT10AQ9GZT5 417 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 PITPNC1Q9UKF7 332 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 IGSF10Q6WRI0 2623 aa12.72□□□□□ -0.37
CNKSR1-202ENST00000374253 LINC00587B1AMM8 73 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 C9JCJ5 164 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 CA1P00915 261 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 RBP4P02753 201 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 CRYGCP07315 174 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 GPR6P46095 362 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 FXYD5Q96DB9 178 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 CACNA1AO00555 2505 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 ELOA3CA0A087WX78 387 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 TYMSP04818 313 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 RPL15P61313 204 aaKnown RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 FOXL1Q12952 345 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 VMO1Q7Z5L0 202 aa12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-202ENST00000374253 CSMD2Q7Z408 3487 aa12.71□□□□□ -0.38
CNKSR1-202ENST00000374253 ZFYVE26Q68DK2 2539 aa12.71□□□□□ -0.38
CNKSR1-202ENST00000374253 SELENOTP62341 195 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 ETFRF1Q6IPR1 90 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 PRORYQ9H606 182 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 IGLV2-8P01709 118 aa12.7□□□□□ -0.38
CNKSR1-202ENST00000374253 LYZP61626 148 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms