RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 U3KQA8 63 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-203ENST00000369259 F2RL2O00254 374 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 CYB561P49447 251 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 PRCDQ00LT1 54 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 WDR82Q6UXN9 313 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 LINC00322Q6ZN03 302 aaPredicted RBP13.13□□□□□ -0.31
CHD1L-203ENST00000369259 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 ZNF714Q96N38 554 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 GPR82Q96P67 336 aa13.13□□□□□ -0.31
CHD1L-203ENST00000369259 NCR2O95944 276 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 P01737 135 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 FABP6P51161 128 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 LOXL3P58215 753 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 PSG3Q16557 428 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 CD177Q8N6Q3 437 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 RAB37Q96AX2 223 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 SGK494Q96LW2 274 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 SIGMAR1Q99720 223 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 GFRA4Q9GZZ7 299 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 EPDR1Q9UM22 224 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 CSN3P07498 182 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 ATP5IP56385 69 aaPredicted RBP13.12□□□□□ -0.31
CHD1L-203ENST00000369259 BOD1L2Q8IYS8 172 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 MLST8Q9BVC4 326 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 C12orf49Q9H741 205 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 ZNF257Q9Y2Q1 563 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 KLF12Q9Y4X4 402 aa13.12□□□□□ -0.31
CHD1L-203ENST00000369259 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.11□□□□□ -0.31
CHD1L-203ENST00000369259 COX7A2P2O60397 106 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 MYCNOSP40205 109 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 CD69Q07108 199 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 C16orf54Q6UWD8 224 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 FXYD5Q96DB9 178 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 PERPQ96FX8 193 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
CHD1L-203ENST00000369259 A0A1B0GV72 72 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 A1L4Q6 167 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 C19orf71A6NCJ1 209 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
CHD1L-203ENST00000369259 MGST3O14880 152 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 MOSP00540 346 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 MPV17P39210 176 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
CHD1L-203ENST00000369259 C10orf113Q5VZT2 155 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 OR9G4Q8NGQ1 327 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 DUSP23Q9BVJ7 150 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 GTSF1LQ9H1H1 148 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 AP5S1Q9NUS5 200 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 DOCK7Q96N67 2140 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 SLC25A5P05141 298 aaKnown RBP13.1□□□□□ -0.31
CHD1L-203ENST00000369259 FABP2P12104 132 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 TMEM177Q53S58 311 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 SPINK14Q6IE38 97 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 S100A7AQ86SG5 101 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 ZNF492Q9P255 531 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 PILRBQ9UKJ0 227 aa13.1□□□□□ -0.31
CHD1L-203ENST00000369259 PPIAL4EA0A075B759 164 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 PPIAL4CA0A0B4J2A2 164 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 SIVA1O15304 175 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 APOHP02749 345 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 PPIAL4FP0DN26 164 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 RNASE2P10153 161 aaKnown RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 PRDX2P32119 198 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 CSN1S1P47710 185 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 MEF2CQ06413 473 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 POU2AF1Q16633 256 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 ADAMTSL5Q6ZMM2 481 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 OR4X2Q8NGF9 303 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 OR1L4Q8NGR5 311 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 OR1L8Q8NGR8 309 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 KLF14Q8TD94 323 aaPredicted RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 TEX48A0A1B0GUV7 120 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 SMAD7O15105 426 aaKnown RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 SMAGPQ0VAQ4 97 aa13.09□□□□□ -0.31
CHD1L-203ENST00000369259 DAZAP1Q96EP5 407 aaKnown RBP13.09□□□□□ -0.31
CHD1L-203ENST00000369259 HAX1O00165 279 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 UPK2O00526 184 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 LTBRP36941 435 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 PATE2Q6UY27 113 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 PDPNQ86YL7 162 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 CACNG8Q8WXS5 425 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 THYN1Q9P016 225 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 TEX50A0A1B0GTY4 177 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 CR1LQ2VPA4 569 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 ATP6V0BQ99437 205 aa13.08□□□□□ -0.32
CHD1L-203ENST00000369259 PGPA6NDG6 321 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 SAA2P0DJI9 122 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-203ENST00000369259 CCL4P13236 92 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 PPP1R32Q7Z5V6 425 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 LEAP2Q969E1 77 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 FAM173AQ9BQD7 235 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 COL25A1Q9BXS0 654 aaPredicted RBP13.07□□□□□ -0.32
CHD1L-203ENST00000369259 B4GALT7Q9UBV7 327 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 KLK10O43240 276 aa13.07□□□□□ -0.32
CHD1L-203ENST00000369259 CT45A1Q5HYN5 189 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms