RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 UPK3AO75631 287 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 NOVP48745 357 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 KLF17Q5JT82 389 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 ASPHD2Q6ICH7 369 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 GFI1Q99684 422 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 TRGV2A0A075B6R0 118 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 TRAV9-1A0A075B6T8 112 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 PGLYRP1O75594 196 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 OR10J3Q5JRS4 329 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 ATG4DQ86TL0 474 aaPredicted RBP9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 ZG16O60844 167 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 ATP5LO75964 103 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 CRYBA2P53672 197 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 TMEM196Q5HYL7 178 aa9.37□□□□□ -0.91
CDC42BPA-205ENST00000366769 NPIPB4C9JG80 1138 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 CRPP02741 224 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 RAMP3O60896 148 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 C10orf91Q5T1B1 145 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 S100A7L2Q5SY68 101 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 PEAR1Q5VY43 1037 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 FAM90A2PQ658T7 463 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 LRTM2Q8N967 370 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 A0A1W2PQF6 199 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 TBR1Q16650 682 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 TEX43Q6ZNM6 134 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 OR2H2O95918 312 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 BGLAPP02818 100 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 GGTLC1Q9BX51 225 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 ATG2AQ2TAZ0 1938 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 SPTY2D1-AS1A0A0U1RR47 76 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 SYNGR3O43761 229 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 RSPO2Q6UXX9 243 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 C1orf162Q8NEQ5 155 aaPredicted RBP9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 TRGV3P03979 118 aa9.36□□□□□ -0.91
CDC42BPA-205ENST00000366769 SYS1-DBNDD2H3BUS1 97 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGLV3-27P01718 113 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 CD69Q07108 199 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NABP1Q96AH0 204 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NPVFQ9HCQ7 196 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 KIAA1671Q9BY89 1806 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE12JA6NER3 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 PEX7O00628 323 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE7O76087 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE12FP0CL80 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE12GP0CL81 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE12IP0CL82 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GAGE4Q13068 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 TMEM42Q69YG0 159 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 PPDPFLQ8WWR9 84 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 C18orf12Q96KH6 178 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NGFRP08138 427 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 TSKUQ8WUA8 353 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 EEF1AKMT3Q96AZ1 226 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 LINC00615Q96LM1 132 aaPredicted RBP9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 MRPL20Q9BYC9 149 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NOTCH2Q04721 2471 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NLRC5Q86WI3 1866 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 CD5LO43866 347 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 TIMP3P35625 211 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 H7C1H1 209 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 DNM1P46Q6ZS02 220 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 GNB1LQ9BYB4 327 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 J3QW42 95 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 SUMO4Q6EEV6 95 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 JMJD8Q96S16 334 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 FBXL15Q9H469 300 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 DEPPQ9NTK1 212 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 ITLN1Q8WWA0 313 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGHV1OR21-1A0A087WYE8 117 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 NAPSAO96009 420 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 HIST1H4AP62805 103 aaKnown RBP9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 SLC25A15Q9Y619 301 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 MGST2Q99735 147 aa9.35□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGHV3OR16-8A0A075B7F1 116 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 GGTLC3B5MD39 225 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 CCL3P10147 92 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGLV3-16A0A075B6K0 115 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 C16orf54Q6UWD8 224 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 NPPCP23582 126 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 C1orf100Q5SVJ3 147 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 IGHV2-70DA0A0C4DH43 119 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 BDP1A6H8Y1 2624 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 DPM2O94777 84 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 WDR82Q6UXN9 313 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 LINC01555Q8NAE3 123 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 NEUROG3Q9Y4Z2 214 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 HERV-K104P63124 156 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 TFF2Q03403 129 aa9.34□□□□□ -0.91
CDC42BPA-205ENST00000366769 SCARF2Q96GP6 870 aaPredicted RBP9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 SLC25A2Q9BXI2 301 aa9.33□□□□□ -0.92
CDC42BPA-205ENST00000366769 LIPT2A6NK58 231 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms