RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PPIAL4EA0A075B759 164 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 TRAV3A0A0B4J244 114 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 PPIAL4FP0DN26 164 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 HSD52Q0P140 79 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 MAJINQ3KP22 176 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 NEUROG1Q92886 237 aa13.23□□□□□ -0.29
CLSTN1-201ENST00000361311 SPTAN1Q13813 2472 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 ETV2O00321 342 aaPredicted RBP13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 RPS20P60866 119 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 BDP1A6H8Y1 2624 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 A0A0G2JLM5 398 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 IGLV3-1P01715 115 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 FAM201AQ5SY85 155 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 MCRIP2Q9BUT9 160 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 HEATR1Q9H583 2144 aaKnown RBP13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 KIAA1671Q9BY89 1806 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 KBTBD11-OT1A0A1B0GTJ5 212 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 WDR82Q6UXN9 313 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 Q6ZVH6 145 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 J3KRW8 73 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 MMP23AO75900 390 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 IL4P05112 153 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 PRCDQ00LT1 54 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 TIMM23BQ5SRD1 257 aa13.22□□□□□ -0.29
CLSTN1-201ENST00000361311 A0A1B0GW15 77 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 OR11H12B2RN74 326 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 SAA1P0DJI8 122 aaPredicted RBP13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 IGLL1P15814 213 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 OR11H2Q8NH07 326 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 TMUB1Q9BVT8 246 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 F2Z2F3 143 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 CEACAM3P40198 252 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 ARHGAP21Q5T5U3 1957 aa13.21□□□□□ -0.29
CLSTN1-201ENST00000361311 USF3Q68DE3 2245 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 IGHV2OR16-5A0A0B4J2B6 119 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 LHX2P50458 406 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 DLX1P56177 255 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 TMEM30BQ3MIR4 351 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 SCRT1Q9BWW7 348 aa13.21□□□□□ -0.3
CLSTN1-201ENST00000361311 PSMG4Q5JS54 123 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 SSC4DQ8WTU2 575 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 SPAARA0A1B0GVQ0 90 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 MLNRO43193 412 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 MGPP08493 103 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 CECR9P0C854 216 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 Q6AWC8 147 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 Q6ZT83 130 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 ANOS1P23352 680 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 LTBRP36941 435 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 GUSBP1Q15486 140 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 SAMD5Q5TGI4 173 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 PMS2CLQ68D20 193 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 FOXC2Q99958 501 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 KLK15Q9H2R5 256 aa13.2□□□□□ -0.3
CLSTN1-201ENST00000361311 M0R3E3 92 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 CCL25O15444 150 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 TMEM186Q96B77 213 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 LINC00479Q96M42 142 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 ZNF138P52744 262 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 V9GYV3 84 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 IGKV3D-15A0A087WSY6 115 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 HBDP02042 147 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 LGALS7P47929 136 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 OR9G4Q8NGQ1 327 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 OR4A5Q8NH83 315 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 TRBV20OR9-2A0A075B6H5 130 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 TCRBV4S1A1TA0A5B7 111 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 PSG9Q00887 426 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 ASCL5Q7RTU5 278 aa13.19□□□□□ -0.3
CLSTN1-201ENST00000361311 TRGV8A0A0C4DH27 118 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 IGHV2-26A0A0B4J1V2 119 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 CDKN1BP46527 198 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 OR1N2Q8NGR9 330 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 RNASE8Q8TDE3 154 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 MRPL20Q9BYC9 149 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 GTSF1LQ9H1H1 148 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 MRPL16Q9NX20 251 aaKnown RBP13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 ESDP10768 282 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 CEACAM8P31997 349 aaPredicted RBP13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 CIARTQ8N365 385 aaPredicted RBP13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
CLSTN1-201ENST00000361311 SH2D7A6NKC9 451 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 IFI27L1Q96BM0 104 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 MBNL3Q9NUK0 354 aaKnown RBP13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 PRR33A8MZF0 331 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 H7C2G1 150 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 FAM216BQ8N7L0 139 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 DPF1Q92782 380 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 GP6Q9HCN6 339 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 FOXA2Q9Y261 457 aaPredicted RBP13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 OR5AN1Q8NGI8 311 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 NDUFS8O00217 210 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 SLAQ13239 276 aa13.17□□□□□ -0.3
CLSTN1-201ENST00000361311 PINLYPA6NC86 204 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms