RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SLC25A4P12235 298 aa13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 PVALBP20472 110 aaPredicted RBP13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 LAMTOR1Q6IAA8 161 aa13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 C9orf62Q8N4C0 152 aa13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 TMEM116Q8NCL8 245 aa13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 ATP6V0BQ99437 205 aa13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 GAR1Q9NY12 217 aaKnown RBP13.65□□□□□ -0.22
PDLIM7-202ENST00000355841 NBEAL1Q6ZS30 2694 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 GPX4P36969 197 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 ARL16Q0P5N6 197 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 TIGITQ495A1 244 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 ACOT7LQ6ZUV0 252 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 HAPLN4Q86UW8 402 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 GPHB5Q86YW7 130 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 OR9G4Q8NGQ1 327 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 RCC1LQ96I51 464 aaKnown RBP13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 ZNF436Q9C0F3 470 aaPredicted RBP13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 HSPB11Q9Y547 144 aa13.64□□□□□ -0.23
PDLIM7-202ENST00000355841 CST7O76096 145 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 YIF1AO95070 293 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 MPC2O95563 127 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 FAM106AQ4KMX7 169 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 SLC35E1Q96K37 410 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 RNF126Q9BV68 326 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 IGSF23A1L1A6 192 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 ZNF207O43670 478 aaKnown RBP13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 SAP30O75446 220 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 RLN2P04090 185 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 IGLC1P0CG04 106 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 OR10J1P30954 320 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 TMEM217Q8N7C4 229 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 CACNG8Q8WXS5 425 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 LYRM2Q9NU23 88 aaPredicted RBP13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 SELENOKQ9Y6D0 94 aa13.63□□□□□ -0.23
PDLIM7-202ENST00000355841 OR10P1Q8NGE3 313 aa13.62□□□□□ -0.23
PDLIM7-202ENST00000355841 SMCO3A2RU48 225 aa13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 RELQ04864 619 aaPredicted RBP13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 TMEM252Q8N6L7 170 aa13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 MCRIP2Q9BUT9 160 aaKnown RBP13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 MBD2Q9UBB5 411 aa13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 PUS1Q9Y606 427 aaKnown RBP eCLIP13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 NOTCH1P46531 2555 aa13.61□□□□□ -0.23
PDLIM7-202ENST00000355841 IGKV1OR2-108A0A075B7D4 117 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 E5RGE8 158 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 LGALS9O00182 355 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 NDUFA4O00483 81 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 CSN3P07498 182 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 AKR1C1Q04828 323 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 SAMD5Q5TGI4 173 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 ADAMTSL5Q6ZMM2 481 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 REC114Q7Z4M0 266 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 TMEM190Q8WZ59 177 aa13.6□□□□□ -0.23
PDLIM7-202ENST00000355841 IGKV1D-37A0A075B6S9 117 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 TRAV14DV4A0A0A6YYC5 116 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 TMEM213A2RRL7 107 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 C2orf70A6NJV1 201 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 ZFP92A6NM28 416 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 SMLR1H3BR10 107 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 ZNF90Q03938 601 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 OR1S2Q8NGQ3 325 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 ELOVL1Q9BW60 279 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 PEMTQ9UBM1 199 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 TRAV30A0A087WSZ9 112 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 GIPP09681 153 aaPredicted RBP13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 NHLH2Q02577 135 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 C9orf66Q5T8R8 295 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
PDLIM7-202ENST00000355841 PET100P0DJ07 73 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 FOLR2P14207 255 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 P2RY1P47900 373 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 SULT1A1P50225 295 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 DLK1P80370 383 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 EWSR1Q01844 656 aaKnown RBP eCLIP13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 SLC38A11Q08AI6 406 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 STX12Q86Y82 276 aa13.58□□□□□ -0.24
PDLIM7-202ENST00000355841 IGHV3-49A0A0A0MS15 119 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 A8MWP6 167 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 SCGB2A1O75556 95 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 CBLN1P23435 193 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 OR2F1Q13607 317 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 ZFAND3Q9H8U3 227 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 DAZ1Q9NQZ3 744 aaKnown RBP13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 UFC1Q9Y3C8 167 aa13.57□□□□□ -0.24
PDLIM7-202ENST00000355841 RD3LP0DJH9 198 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 PSG1P11464 419 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 RAP2BP61225 183 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 THAP8Q8NA92 274 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 OR2T35Q8NGX2 323 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 THAP6Q8TBB0 222 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 IGHV3OR16-13A0A075B7E8 117 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 IGHV3-74A0A0B4J1X5 117 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 YPEL3P61236 119 aaPredicted RBP13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 TMEM144Q7Z5S9 345 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 LILRB2Q8N423 598 aa13.56□□□□□ -0.24
PDLIM7-202ENST00000355841 SLC25A31Q9H0C2 315 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms