RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF703Q9H7S9 590 aaPredicted RBP5.23□□□□□ -1.57
VCAN-203ENST00000343200 TRBV5-4A0A0C4DH59 114 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 WTIPA6NIX2 430 aaPredicted RBP5.23□□□□□ -1.57
VCAN-203ENST00000343200 DUX5Q96PT3 197 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 NAA38Q9BRA0 125 aaKnown RBP5.23□□□□□ -1.57
VCAN-203ENST00000343200 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 PRADC1Q9BSG0 188 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 CXCL16Q9H2A7 254 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 PTGDSP41222 190 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 RND2P52198 227 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 PDFQ9HBH1 243 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 ABCA12Q86UK0 2595 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 AKAP13Q12802 2813 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 IGKV6-21A0A0C4DH24 114 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 CLLU1OSQ5K130 101 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 IGHV1-24A0A0C4DH33 117 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 A0A1B0GTL3 188 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 IGHG2P01859 326 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 BGLAPP02818 100 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 NBEAP1P0C6P0 100 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 TRBV5-5A0A0J9YX44 114 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 NPIPB13A6NJU9 1138 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 IGHV3-21A0A0B4J1V1 117 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 CXorf51AA0A1B0GTR3 108 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 PGLYRP1O75594 196 aaPredicted RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 ETDBQ3ZM63 59 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 WIPI1Q5MNZ9 446 aaPredicted RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 C8orf82Q6P1X6 216 aaPredicted RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 DPH3Q96FX2 82 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 A0A1W2PPI3 338 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 C9JCJ5 164 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 CXCL1P09341 107 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 SRSF3P84103 164 aaKnown RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 CRYGNQ8WXF5 182 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 SPSB2Q99619 263 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 NANOS3P60323 173 aaKnown RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 C1QL3Q5VWW1 255 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 SF3B5Q9BWJ5 86 aaKnown RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 PEMTQ9UBM1 199 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 UPK3AO75631 287 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 OR13A1Q8NGR1 328 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 IGHV3-20A0A0C4DH32 117 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 LIPT2A6NK58 231 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 ALKAL1Q6UXT8 129 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 IGHV2-70DA0A0C4DH43 119 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 J3QT63 122 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 RNASE4P34096 147 aaKnown RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 GLRXP35754 106 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 LILRA3Q8N6C8 439 aaPredicted RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 SLC25A39Q9BZJ4 359 aaPredicted RBP5.22□□□□□ -1.57
VCAN-203ENST00000343200 SELENOKQ9Y6D0 94 aa5.22□□□□□ -1.57
VCAN-203ENST00000343200 PAX4O43316 350 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 CCL11P51671 97 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 POLR3KQ9Y2Y1 108 aaPredicted RBP5.21□□□□□ -1.57
VCAN-203ENST00000343200 SHISA9B4DS77 424 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 SYNJ2BPP57105 145 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 UNC119Q13432 240 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 HCP5Q6MZN7 132 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 TIMM21Q9BVV7 248 aa5.21□□□□□ -1.57
VCAN-203ENST00000343200 UCP2P55851 309 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 TMEM52BQ4KMG9 183 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 FAM106AQ4KMX7 169 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 LINC01545Q5VT33 79 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 hADV29S1A0JD25 119 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 TCRAP04437 139 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 MAGEA5P43359 124 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 CCL14Q16627 93 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 CEND1Q8N111 149 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 GCSAMQ8N6F7 178 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 EAF1Q96JC9 268 aaPredicted RBP5.21□□□□□ -1.58
VCAN-203ENST00000343200 WFDC6Q9BQY6 131 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 OTORQ9NRC9 128 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 hCG_38984A0A1B0GV85 526 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 CCL2P13500 99 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 CDKN1AP38936 164 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 IGKV6D-21A0A0A0MT36 114 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 D6R8Y8 96 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 PAPPA2Q9BXP8 1791 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 ZG16O60844 167 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 TFF3Q07654 80 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 Q96M66 194 aa5.21□□□□□ -1.58
VCAN-203ENST00000343200 FAM236AA0A1B0GUQ0 79 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 FAM236BA0A1B0GV22 79 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 TCRBV5S1A1TA0A578 114 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SHISA7A6NL88 538 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 IL11RAQ14626 422 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 ZAR1Q86SH2 424 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 RNF166Q96A37 237 aaPredicted RBP5.2□□□□□ -1.58
VCAN-203ENST00000343200 MYMXA0A1B0GTQ4 84 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SCTP09683 121 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 VPREB1P12018 145 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 KLRD1Q13241 179 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 GTSCR1Q86UQ5 136 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 OR11H6Q8NGC7 330 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 SLC25A38Q96DW6 304 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 VSTM2LQ96N03 204 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 CDCP2Q5VXM1 449 aa5.2□□□□□ -1.58
VCAN-203ENST00000343200 ATG4DQ86TL0 474 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms