RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 SMIM10Q96HG1 83 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 SMCHD1A6NHR9 2005 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 F5P12259 2224 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 F2Z2F3 143 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 SAA2-SAA4A0A096LPE2 208 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 TM4SF5O14894 197 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 SAA2P0DJI9 122 aaPredicted RBP8.17□□□□□ -1.1
COL4A6-201ENST00000334504 LINC01559Q495D7 138 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 A0A0A6YYD4 124 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 GAGE1Q13065 139 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
COL4A6-201ENST00000334504 DOCK5Q9H7D0 1870 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 HGFACQ04756 655 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 FAM216BQ8N7L0 139 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 NUP35Q8NFH5 326 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 SLC50A1Q9BRV3 221 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 ZNF319Q9P2F9 582 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 ADARB2-AS1A8MUL3 147 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 ADCYAP1P18509 176 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 RNF125Q96EQ8 232 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 LTBRP36941 435 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 CSRP3P50461 194 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 ZNF138P52744 262 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 GFI1Q99684 422 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 LY6DQ14210 128 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 PVRIGQ6DKI7 326 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 LYZL1Q6UWQ5 148 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 SLC25A48Q6ZT89 311 aaKnown RBP8.16□□□□□ -1.1
COL4A6-201ENST00000334504 AGMATQ9BSE5 352 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 KNTC1P50748 2209 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 A0A1B0GWJ7 208 aa8.16□□□□□ -1.1
COL4A6-201ENST00000334504 EIF4EBP2Q13542 120 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-201ENST00000334504 FAM57AQ8TBR7 257 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 MRPL27Q9P0M9 148 aaKnown RBP8.15□□□□□ -1.1
COL4A6-201ENST00000334504 CCDC88CQ9P219 2028 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 WDR83OSQ9Y284 106 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV2-40A0A087WW87 121 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-201ENST00000334504 H3BMM0 161 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 PAX4O43316 350 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV2D-40P01614 121 aaPredicted RBP8.15□□□□□ -1.1
COL4A6-201ENST00000334504 TCRAP04437 139 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 IFITM1P13164 125 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 PDLIM4P50479 330 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 CDCP2Q5VXM1 449 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 WFDC12Q8WWY7 111 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 UBE2WQ96B02 151 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 ABCA3Q99758 1704 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 IGKV1D-8A0A087WSZ0 117 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 TRAV1-1A0A0B4J248 108 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 C20orf144Q9BQM9 153 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 NRN1LQ496H8 165 aa8.15□□□□□ -1.1
COL4A6-201ENST00000334504 BRWD1Q9NSI6 2320 aa8.15□□□□□ -1.11
COL4A6-201ENST00000334504 TMEM8BA6NDV4 472 aa8.15□□□□□ -1.11
COL4A6-201ENST00000334504 ZNF688P0C7X2 276 aa8.15□□□□□ -1.11
COL4A6-201ENST00000334504 TREML4Q6UXN2 200 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 JPT2Q9H910 190 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 DPM3Q9P2X0 92 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 TRACP01848 142 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 COX6A1P12074 109 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 IGHV3-11P01762 117 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 TMEM158Q8WZ71 300 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 C1QTNF5Q9BXJ0 243 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 OTOFQ9HC10 1997 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 RHOGP84095 191 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 C8orf46Q8TAG6 207 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 LYZL4Q96KX0 146 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 MYO16Q9Y6X6 1858 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 C9orf118A6NHY6 69 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 J3QW42 95 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 GLRXP35754 106 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 STPG4Q8N801 248 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 ABHD17AQ96GS6 310 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 MBNL3Q9NUK0 354 aaKnown RBP8.14□□□□□ -1.11
COL4A6-201ENST00000334504 RNF115Q9Y4L5 304 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 TFF1P04155 84 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 GGTLC1Q9BX51 225 aa8.14□□□□□ -1.11
COL4A6-201ENST00000334504 ARAP2Q8WZ64 1704 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 ZC2HC1BQ5TFG8 222 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 PAQR4Q8N4S7 273 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-201ENST00000334504 OVOL2Q9BRP0 275 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 SCN4AP35499 1836 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 IGLV3-21P80748 117 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-201ENST00000334504 PRB3Q04118 309 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-201ENST00000334504 PCOLCEQ15113 449 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 C1orf53Q5VUE5 145 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 ZNF474Q6S9Z5 364 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-201ENST00000334504 ZNF497Q6ZNH5 498 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 DUSP15Q9H1R2 295 aaPredicted RBP8.13□□□□□ -1.11
COL4A6-201ENST00000334504 EFEMP2O95967 443 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 MST1P26927 711 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 SS18L2Q9UHA2 77 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 PRCDQ00LT1 54 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 TCF15Q12870 199 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 EXOC3-AS1Q8N2X6 119 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 TMEM167AQ8TBQ9 72 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 SMKR1H3BMG3 65 aa8.13□□□□□ -1.11
COL4A6-201ENST00000334504 ATAD5Q96QE3 1844 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 A0A1B0GUS0 222 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 LINC01549A6NIU2 74 aa8.12□□□□□ -1.11
COL4A6-201ENST00000334504 LINC00271P0C7V0 271 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms