RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 RNF223E7ERA6 249 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 PDE6DO43924 150 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 IGHV3-48P01763 117 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 CRIP2P52943 208 aaPredicted RBP14.06□□□□□ -0.16
RAB39A-201ENST00000320578 C16orf82Q7Z2V1 217 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 SSX3Q99909 188 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 NIPSNAP3BQ9BS92 247 aa14.06□□□□□ -0.16
RAB39A-201ENST00000320578 UTP20O75691 2785 aaKnown RBP14.05□□□□□ -0.16
RAB39A-201ENST00000320578 PTPN13Q12923 2485 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 H3BQ15 152 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 M0QZK8 103 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 COX7A2P2O60397 106 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 IGHV4-31P0DP07 118 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 AKIRIN2Q53H80 203 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 C10orf113Q5VZT2 155 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 IQCF2Q8IXL9 164 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 HSPB9Q9BQS6 159 aa14.05□□□□□ -0.16
RAB39A-201ENST00000320578 A6NDX4 124 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 C11orf94C9JXX5 98 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 F6UZH7 168 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 TGFAP01135 160 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 FCGR2BP31994 310 aaPredicted RBP14.04□□□□□ -0.16
RAB39A-201ENST00000320578 PNRC1Q12796 327 aaPredicted RBP14.04□□□□□ -0.16
RAB39A-201ENST00000320578 TVP23CQ96ET8 276 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 PITPNC1Q9UKF7 332 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 MFAP4P55083 255 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 AWAT1Q58HT5 328 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 PATE2Q6UY27 113 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 KRTAP1-3Q8IUG1 177 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 OR4F5Q8NH21 305 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 OR4F4Q96R69 305 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 TXN2Q99757 166 aa14.04□□□□□ -0.16
RAB39A-201ENST00000320578 STXBP6Q8NFX7 210 aa14.03□□□□□ -0.16
RAB39A-201ENST00000320578 VN1R17PQ8TDU5 208 aa14.03□□□□□ -0.16
RAB39A-201ENST00000320578 FAM167A-AS1Q96KT0 104 aa14.03□□□□□ -0.16
RAB39A-201ENST00000320578 PUS1Q9Y606 427 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAB39A-201ENST00000320578 ASH1LQ9NR48 2969 aaKnown RBP14.02□□□□□ -0.16
RAB39A-201ENST00000320578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.02□□□□□ -0.16
RAB39A-201ENST00000320578 IGHV3-21A0A0B4J1V1 117 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 C7orf77A4D0Y5 90 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 B4DEV8 164 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 ATP6V0E1O15342 81 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 HYPMO75409 117 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 FSHBP01225 129 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 IGKV1-17P01599 117 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 YPEL3P61236 119 aaPredicted RBP14.02□□□□□ -0.16
RAB39A-201ENST00000320578 C9orf139Q6ZV77 190 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 TUBA4BQ9H853 241 aa14.02□□□□□ -0.16
RAB39A-201ENST00000320578 FAM74A7A6NL05 159 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 M0R036 132 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 ANKRD17O75179 2603 aaKnown RBP14.01□□□□□ -0.17
RAB39A-201ENST00000320578 AMY1AP04745 511 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 CEBPGP53567 150 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 UNQ5815/PRO19632Q6UWF5 114 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 ZNF503Q96F45 646 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 Q96MF0 132 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 SMCO4Q9NRQ5 59 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 SCGB2A1O75556 95 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 OR5T1Q8NG75 326 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 SLC25A2Q9BXI2 301 aa14.01□□□□□ -0.17
RAB39A-201ENST00000320578 A0A087WWC5 75 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 TRBV9A0A0B4J1U6 114 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 ZNF727A8MUV8 499 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 H3BUX3 64 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 BRI3O95415 125 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 TOMM40O96008 361 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 PSG1P11464 419 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 C19orf54Q5BKX5 351 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 CST9LP1Q5W188 147 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 OR51G1Q8NGK1 321 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 TMUB1Q9BVT8 246 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 SDF2L1Q9HCN8 221 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 RPS10P5Q9NQ39 176 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 ZNF355PQ9NSJ1 428 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 C21orf62Q9NYP8 219 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 CRYBG3Q68DQ2 2970 aa14□□□□□ -0.17
RAB39A-201ENST00000320578 A0A1W2PRE2 83 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 OR7C2O60412 319 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 RD3LP0DJH9 198 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 TIGITQ495A1 244 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 CYB5R2Q6BCY4 276 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 LINC00305Q7Z4B0 112 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 TMEM219Q86XT9 240 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 ATP6V0BQ99437 205 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 NAT8Q9UHE5 227 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 NAV2Q8IVL1 2488 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 NDUFB8O95169 186 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 IGF1P05019 195 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 UBE2G2P60604 165 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 OR5AU1Q8NGC0 362 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 OR1B1Q8NGR6 318 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 C11orf52Q96A22 123 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 SMIM7Q9BQ49 75 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 PARLQ9H300 379 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 MRPL27Q9P0M9 148 aaKnown RBP13.99□□□□□ -0.17
RAB39A-201ENST00000320578 DOK5Q9P104 306 aa13.99□□□□□ -0.17
RAB39A-201ENST00000320578 YTHDF2Q9Y5A9 579 aaKnown RBP13.99□□□□□ -0.17
RAB39A-201ENST00000320578 F8W735 103 aaPredicted RBP13.98□□□□□ -0.17
RAB39A-201ENST00000320578 GNG7O60262 68 aa13.98□□□□□ -0.17
RAB39A-201ENST00000320578 IGHG2P01859 326 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms