RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 FOXA2Q9Y261 457 aaPredicted RBP11.94□□□□□ -0.5
COL6A2-201ENST00000300527 GAGE12BA1L429 117 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 WFDC8Q8IUA0 241 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 PRNDQ9UKY0 176 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 POLEQ07864 2286 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 TEX50A0A1B0GTY4 177 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 HBBP68871 147 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 PLCE1Q9P212 2302 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 PKDREJQ9NTG1 2253 aa11.93□□□□□ -0.5
COL6A2-201ENST00000300527 FOXE3Q13461 319 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 TEX45Q8NA69 505 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 URB1-AS1Q96HZ7 61 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 MAP1LC3CQ9BXW4 147 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 DCHS1Q96JQ0 3298 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 INTS1Q8N201 2190 aaKnown RBP11.92□□□□□ -0.5
COL6A2-201ENST00000300527 P01737 135 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 PRR7Q8TB68 274 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 CHRDL1Q9BU40 450 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 TRAV8-1A0A0A6YYK1 113 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 FAM90A9PA6NNJ1 464 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 SAA1P0DJI8 122 aaPredicted RBP11.92□□□□□ -0.5
COL6A2-201ENST00000300527 KIR2DS2P43631 304 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 FXYD7P58549 80 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 ARF6P62330 175 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 PEAR1Q5VY43 1037 aaPredicted RBP11.92□□□□□ -0.5
COL6A2-201ENST00000300527 ZNF329Q86UD4 541 aa11.92□□□□□ -0.5
COL6A2-201ENST00000300527 LOC400499M0QZD8 3231 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 TNRC6BQ9UPQ9 1833 aaKnown RBP11.91□□□□□ -0.5
COL6A2-201ENST00000300527 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 HTR1DP28221 377 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 C12orf54Q6X4T0 127 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 LINC00322Q6ZN03 302 aaPredicted RBP11.91□□□□□ -0.5
COL6A2-201ENST00000300527 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 CCL13Q99616 98 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 RTL8BQ17RB0 113 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 LINC00305Q7Z4B0 112 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 GCSAMQ8N6F7 178 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 OR8A1Q8NGG7 326 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 FAM167A-AS1Q96KT0 104 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 ST20Q9HBF5 79 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 GVINP1Q7Z2Y8 2422 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 GAGE10A6NGK3 116 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 C21orf140B9A014 251 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 PRCDQ00LT1 54 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 HCP5Q6MZN7 132 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 FAM90A1Q86YD7 464 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 ZPBPQ9BS86 351 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
COL6A2-201ENST00000300527 LOC389332A0A1B0GUA5 103 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 C7orf71A4D174 169 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 K7ERU9 68 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 UPK2O00526 184 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 KLK10O43240 276 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 ERHP84090 104 aaKnown RBP11.9□□□□□ -0.5
COL6A2-201ENST00000300527 CD69Q07108 199 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 TM4SF20Q53R12 229 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 ITLN1Q8WWA0 313 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 SARAFQ96BY9 339 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 RNASE2P10153 161 aaKnown RBP11.9□□□□□ -0.5
COL6A2-201ENST00000300527 INO80CQ6PI98 192 aaPredicted RBP11.9□□□□□ -0.5
COL6A2-201ENST00000300527 DDB2Q92466 427 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
COL6A2-201ENST00000300527 GPR183P32249 361 aa11.9□□□□□ -0.51
COL6A2-201ENST00000300527 AARDQ4LEZ3 155 aa11.9□□□□□ -0.51
COL6A2-201ENST00000300527 FAM216BQ8N7L0 139 aa11.9□□□□□ -0.51
COL6A2-201ENST00000300527 C9orf172C9J069 976 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 E7EUB6 86 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 BPIFA4PQ86YQ2 179 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 hADV38S2A0JD32 116 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 COL8A1P27658 744 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 DEFB125Q8N687 156 aa11.89□□□□□ -0.51
COL6A2-201ENST00000300527 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
COL6A2-201ENST00000300527 A0A1W2PRD5 423 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 A0A1W2PRF3 423 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 A0A1W2PRM7 423 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 M0R1B8 84 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 C17orf58Q2M2W7 97 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 Q71RC1 249 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-201ENST00000300527 MRPL36Q9P0J6 103 aaKnown RBP11.88□□□□□ -0.51
COL6A2-201ENST00000300527 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 SERTM2A0A1B0GWG4 89 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 A8MWL6 223 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 H3BUT2 72 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-201ENST00000300527 PATE2Q6UY27 113 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-201ENST00000300527 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 CIARTQ8N365 385 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-201ENST00000300527 GTSF1Q8WW33 167 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 EPDR1Q9UM22 224 aa11.88□□□□□ -0.51
COL6A2-201ENST00000300527 IGHV3-72A0A0B4J1Y9 119 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 ENSAO43768 121 aaKnown RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 HLA-DRB1P01911 266 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 FAM120AOSQ5T036 256 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 WFDC3Q8IUB2 231 aa11.87□□□□□ -0.51
COL6A2-201ENST00000300527 MRPL20Q9BYC9 149 aaKnown RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 FBLL1A6NHQ2 334 aaKnown RBP11.87□□□□□ -0.51
COL6A2-201ENST00000300527 SRRM5B3KS81 715 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms