RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TMEM170AQ8WVE7 144 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 NPIPB3Q92617 1050 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 MARC2Q969Z3 335 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 WDR89Q96FK6 387 aaPredicted RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 NARS2Q96I59 477 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 ZNF436Q9C0F3 470 aaPredicted RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 TECRQ9NZ01 308 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 MRPL36Q9P0J6 103 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 MRPL27Q9P0M9 148 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 MLXQ9UH92 298 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 RCL1Q9Y2P8 373 aaKnown RBP4.96□□□□□ -1.62
CD44-204ENST00000279452 PLXNB1O43157 2135 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 ANK2Q01484 3957 aa4.96□□□□□ -1.62
CD44-204ENST00000279452 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 IZUMO1RA6ND01 250 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 C15orf62A8K5M9 175 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 SIX6O95475 246 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 IL5P05113 134 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 FABP1P07148 127 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 PVALBP20472 110 aaPredicted RBP4.95□□□□□ -1.62
CD44-204ENST00000279452 TFPI2P48307 235 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 ELLP55199 621 aaPredicted RBP4.95□□□□□ -1.62
CD44-204ENST00000279452 ATP5IP56385 69 aaPredicted RBP4.95□□□□□ -1.62
CD44-204ENST00000279452 CD81P60033 236 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 RRAS2P62070 204 aaPredicted RBP4.95□□□□□ -1.62
CD44-204ENST00000279452 ID3Q02535 119 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 DEFB114Q30KQ6 69 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 LRRC37A5PQ49AS3 106 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 PVRIGQ6DKI7 326 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 LAMTOR1Q6IAA8 161 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 TOMM20LQ6UXN7 152 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 ADAMTSL5Q6ZMM2 481 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 ACOT7LQ6ZUV0 252 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 TMEM61Q8N0U2 210 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 TMEM116Q8NCL8 245 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 OR2K2Q8NGT1 345 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 Q8WTZ3 238 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 C2orf50Q96LR7 162 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 METTL26Q96S19 204 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 RAB40CQ96S21 281 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 PBDC1Q9BVG4 233 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 SIGLEC8Q9NYZ4 499 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 SMAD5-AS1Q9Y6J3 95 aa4.95□□□□□ -1.62
CD44-204ENST00000279452 IGHV7-4-1A0A0J9YVY3 117 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 SNRPGP15A8MWD9 76 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 K7EPK0 472 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 PTTG1O95997 202 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 MBPP02686 304 aaPredicted RBP4.94□□□□□ -1.62
CD44-204ENST00000279452 IL4P05112 153 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 METTL15P1P0C7V9 234 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 IGLC1P0CG04 106 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 RD3LP0DJH9 198 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 NPPCP23582 126 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 GPX4P36969 197 aaPredicted RBP4.94□□□□□ -1.62
CD44-204ENST00000279452 LYZP61626 148 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 OR2F1Q13607 317 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 GAMTQ14353 236 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 OR10P1Q8NGE3 313 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 PPP1R14BQ96C90 147 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 GRAMD2BQ96HH9 432 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 NEURL2Q9BR09 285 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 RHPN1-AS1Q9BWJ2 59 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 TMEM231Q9H6L2 316 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 TUBA4BQ9H853 241 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 MGAT4CQ9UBM8 478 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 SMPXQ9UHP9 88 aa4.94□□□□□ -1.62
CD44-204ENST00000279452 A0A1W2PS18 150 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 C7orf66A4D0T2 115 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 OR4C46A6NHA9 309 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 K7EMT4 169 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 DNASE2O00115 360 aaPredicted RBP4.93□□□□□ -1.62
CD44-204ENST00000279452 TSC22D2O75157 780 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 CCNKO75909 580 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 TOMM40O96008 361 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 IGKV1-17P01599 117 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RLN2P04090 185 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 CD7P09564 240 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 ZNF90Q03938 601 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RAB32Q13637 225 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RGS21Q2M5E4 152 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 TCF24Q7RTU0 167 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 STX12Q86Y82 276 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 LILRB2Q8N423 598 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 GBGT1Q8N5D6 347 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 TMEM217Q8N7C4 229 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 OR51G1Q8NGK1 321 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 ST8SIA2Q92186 375 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RNF125Q96EQ8 232 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 SMIM8Q96KF7 97 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RNF2Q99496 336 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 ASCL2Q99929 193 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 MARVELD1Q9BSK0 173 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 ZFAND3Q9H8U3 227 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 UBQLN2Q9UHD9 624 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 RABAC1Q9UI14 185 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 ALG5Q9Y673 324 aa4.93□□□□□ -1.62
CD44-204ENST00000279452 WNK1Q9H4A3 2382 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 TRAV25A0A0B4J276 109 aa4.92□□□□□ -1.62
CD44-204ENST00000279452 FAM24AA6NFZ4 105 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms