RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 TRGV9Q99603 122 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 PAXXQ9BUH6 204 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 PRO1933Q9H354 126 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 ICE1Q9Y2F5 2266 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 SLC25A17O43808 307 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 CRISP2P16562 243 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 RANP62826 216 aaKnown RBP20.13■□□□□ 0.81
ROM1-201ENST00000278833 SSBP2P81877 361 aaPredicted RBP20.13■□□□□ 0.81
ROM1-201ENST00000278833 CORTO00230 105 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 MYCNOSP40205 109 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 CASP6P55212 293 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 LINC00310P59036 64 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 OR8I2Q8N0Y5 310 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 ST6GALNAC3Q8NDV1 305 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 FXYD5Q96DB9 178 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 SMIM12Q96EX1 92 aa20.12■□□□□ 0.81
ROM1-201ENST00000278833 CD3EP07766 207 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 TPPP2P59282 170 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 FBXL19-AS1Q494R0 122 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 ZNF329Q86UD4 541 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 NDUFAF3Q9BU61 184 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 SH3BGRL2Q9UJC5 107 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 TRAV5A0A0B4J249 113 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 SNURFLB1AK76 121 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 FCN1O00602 326 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 IBA57Q5T440 356 aaKnown RBP20.11■□□□□ 0.81
ROM1-201ENST00000278833 RASL11AQ6T310 242 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 LINC00469Q8N7U9 141 aa20.11■□□□□ 0.81
ROM1-201ENST00000278833 NUPR1O60356 82 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 IER3P46695 156 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 PRRX1P54821 245 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 PLP1P60201 277 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 C8orf46Q8TAG6 207 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 PERPQ96FX8 193 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 TPSG1Q9NRR2 321 aa20.1■□□□□ 0.81
ROM1-201ENST00000278833 IGHV2-26A0A0B4J1V2 119 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 RPL27AP46776 148 aaKnown RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 COMPP49747 757 aaPredicted RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 TMEM136Q6ZRR5 245 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 TMEM116Q8NCL8 245 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 MBD6Q96DN6 1003 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 MS4A10Q96PG2 267 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 RNASE7Q9H1E1 156 aaKnown RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 MRPL36Q9P0J6 103 aaKnown RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 AMMECR1Q9Y4X0 333 aaPredicted RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 KIR2DL5BA0A0G2JN68 375 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 KIR2DL5BA0A0G2JPC4 375 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 ZNF705GA8MUZ8 300 aaPredicted RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 PEX7O00628 323 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 OR10J3Q5JRS4 329 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 KIR2DL5AQ8N109 375 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 WIPF2Q8TF74 440 aaPredicted RBP20.09■□□□□ 0.81
ROM1-201ENST00000278833 C22orf15Q8WYQ4 148 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 TMEM190Q8WZ59 177 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 RNF5Q99942 180 aa20.09■□□□□ 0.81
ROM1-201ENST00000278833 A0A1B0GUS0 222 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 HLA-DQA1P01909 254 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 AMY1AP04745 511 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 ZNF841Q6ZN19 808 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 CHRDL1Q9BU40 450 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 NAGKQ9UJ70 344 aa20.08■□□□□ 0.81
ROM1-201ENST00000278833 ARFGEF3Q5TH69 2177 aa20.08■□□□□ 0.8
ROM1-201ENST00000278833 MYO18BQ8IUG5 2567 aa20.08■□□□□ 0.8
ROM1-201ENST00000278833 IZUMO1RA6ND01 250 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 RITA1Q96K30 269 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 SRSF8Q9BRL6 282 aaKnown RBP20.07■□□□□ 0.8
ROM1-201ENST00000278833 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.07■□□□□ 0.8
ROM1-201ENST00000278833 GRIFINA4D1Z8 144 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 C22orf46C9J442 243 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 GNLYP22749 145 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 UQCRFS1P47985 274 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 CLEC7AQ9BXN2 247 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 TNFRSF19Q9NS68 423 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 SIGLEC9Q9Y336 463 aa20.07■□□□□ 0.8
ROM1-201ENST00000278833 PYYP10082 97 aa20.06■□□□□ 0.8
ROM1-201ENST00000278833 C1orf194Q5T5A4 169 aa20.06■□□□□ 0.8
ROM1-201ENST00000278833 C2orf88Q9BSF0 95 aa20.06■□□□□ 0.8
ROM1-201ENST00000278833 SERF1AO75920 110 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 MFAP2P55001 183 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 TMEM183BQ1AE95 376 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 LINC00305Q7Z4B0 112 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 KLF12Q9Y4X4 402 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 IGHV1-3A0A0C4DH29 117 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 BUB1B-PAK6H3BSN5 160 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 PLA2G2AP14555 144 aa20.05■□□□□ 0.8
ROM1-201ENST00000278833 HIVEP3Q5T1R4 2406 aa20.04■□□□□ 0.8
ROM1-201ENST00000278833 C7orf69Q9H7B7 122 aa20.04■□□□□ 0.8
ROM1-201ENST00000278833 F11RQ9Y624 299 aaKnown RBP20.04■□□□□ 0.8
ROM1-201ENST00000278833 FXYD3Q14802 87 aa20.03■□□□□ 0.8
ROM1-201ENST00000278833 GRAMD2BQ96HH9 432 aa20.03■□□□□ 0.8
ROM1-201ENST00000278833 NAT8BQ9UHF3 227 aa20.03■□□□□ 0.8
ROM1-201ENST00000278833 POLR3KQ9Y2Y1 108 aaPredicted RBP20.03■□□□□ 0.8
ROM1-201ENST00000278833 TEX22C9J3V5 150 aa20.03■□□□□ 0.8
ROM1-201ENST00000278833 MGST1P10620 155 aaKnown RBP20.03■□□□□ 0.8
ROM1-201ENST00000278833 FLNCQ14315 2725 aa20.03■□□□□ 0.8
ROM1-201ENST00000278833 HELZ2Q9BYK8 2649 aaKnown RBP20.02■□□□□ 0.8
ROM1-201ENST00000278833 LY6LH3BQJ8 138 aa20.02■□□□□ 0.8
ROM1-201ENST00000278833 ENSAO43768 121 aaKnown RBP20.02■□□□□ 0.8
ROM1-201ENST00000278833 FRMD6-AS1P0C7T7 363 aa20.02■□□□□ 0.8
ROM1-201ENST00000278833 TNXAQ16473 311 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms