RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 C18orf32Q8TCD1 76 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 SERTAD4Q9NUC0 356 aa13.03□□□□□ -0.32
MAP1LC3B-201ENST00000268607 ACTL6BO94805 426 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 APCSP02743 223 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 UBE2G1P62253 170 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 Q5PR19 223 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 FAM201AQ5SY85 155 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 CD177Q8N6Q3 437 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 OR13A1Q8NGR1 328 aa13.02□□□□□ -0.32
MAP1LC3B-201ENST00000268607 PRSS46E5RG02 174 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 HLA-DQA1P01909 254 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 LINC00869P0C866 280 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SLAQ13239 276 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 STPG3Q8N7X2 389 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR8B3Q8NGG8 313 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR8B2Q96RD0 313 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PSG11Q9UQ72 335 aa13.02□□□□□ -0.33
MAP1LC3B-201ENST00000268607 USP9XQ93008 2570 aaPredicted RBP13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 MT-CO2P00403 227 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GRNP28799 593 aaKnown RBP13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SPRY3O43610 288 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 MGST1P10620 155 aaKnown RBP13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PRAMEF5Q5TYX0 476 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 MIR17HGQ75NE6 70 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FAM234AQ9H0X4 552 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ARL2-SNX15V9GYD0 113 aa13.01□□□□□ -0.33
MAP1LC3B-201ENST00000268607 hDV102S1A0JD36 115 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FCGR3BO75015 233 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR10J4P0C629 311 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 IGLC1P0CG04 106 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 USF1P22415 310 aaPredicted RBP13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 KLRB1Q12918 225 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PSG5Q15238 335 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ZNF841Q6ZN19 808 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR4A16Q8NH70 328 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 CLEC5AQ9NY25 188 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TECRQ9NZ01 308 aaKnown RBP13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR7C2O60412 319 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TIGITQ495A1 244 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OSTCQ9NRP0 149 aa13□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TRAV3A0A0B4J244 114 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PRDX2P32119 198 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 BMI1P35226 326 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PAX2Q02962 417 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 IBA57Q5T440 356 aaKnown RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 MBNL2Q5VZF2 373 aaKnown RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR2V2Q96R30 315 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 NPVFQ9HCQ7 196 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 LSM4Q9Y4Z0 139 aaKnown RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 CHD6Q8TD26 2715 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OOEPA6NGQ2 149 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR4C46A6NHA9 309 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 G3V4G9 280 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 VDAC2P45880 294 aaPredicted RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 COX19Q49B96 90 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SLC35E4Q6ICL7 350 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 RNASEKQ6P5S7 137 aaKnown RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 NHLRC2Q8NBF2 726 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ZNRF1Q8ND25 227 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR1B1Q8NGR6 318 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SSBP3Q9BWW4 388 aaPredicted RBP12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PRORYQ9H606 182 aa12.99□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FAM90A27PA6NNH2 459 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 AREGP15514 252 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 C12orf54Q6X4T0 127 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR4S2Q8NH73 311 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 FAM168AQ92567 244 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 HSD17B10Q99714 261 aaKnown RBP12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GCM1Q9NP62 436 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 A0A087X0K7 114 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SMIM27A0A1W2PRY6 76 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ARF6P62330 175 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TEPPQ6URK8 271 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 Q8TCH9 128 aa12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ZNF331Q9NQX6 463 aaPredicted RBP12.98□□□□□ -0.33
MAP1LC3B-201ENST00000268607 IGKV1D-17A0A075B6S4 117 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GAGE10A6NGK3 116 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 CCL21O00585 134 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 LGALS7P47929 136 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PRR31Q5SQ13 230 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 SLC25A34Q6PIV7 304 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR1N2Q8NGR9 330 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ZNF835Q9Y2P0 537 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ISLRO14498 428 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 CD5LO43866 347 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 IGFBP2P18065 325 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 UQCRFS1P47985 274 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 RPL8P62917 257 aaKnown RBP12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TMEM108Q6UXF1 575 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 OR2T6Q8NHC8 308 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PRR7Q8TB68 274 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 TMEM186Q96B77 213 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 CHRDL1Q9BU40 450 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 ST20Q9HBF5 79 aa12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 PEF1Q9UBV8 284 aaKnown RBP12.97□□□□□ -0.33
MAP1LC3B-201ENST00000268607 GNG7O60262 68 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms