RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 PDCD11Q14690 1871 aaKnown RBP13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 FABP5P3A8MUU1 101 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 LAMTOR3Q9UHA4 124 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 SMKR1H3BMG3 65 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 SRSF1Q07955 248 aaKnown RBP eCLIP13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 EFNB3Q15768 340 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 S100A7L2Q5SY68 101 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 OR4X2Q8NGF9 303 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 ALPK2Q86TB3 2170 aa13.98□□□□□ -0.17
TSPAN3-201ENST00000267970 A0A0G2JLM5 398 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 TRGV4A0A0C4DH28 118 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 PRB1P04280 392 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 SELLP14151 372 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 A0A1B0GTI1 187 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 ATXN8Q156A1 80 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 TMEM256Q8N2U0 113 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 MLNRO43193 412 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 SHANK3Q9BYB0 1731 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 COL11A1P12107 1806 aaPredicted RBP13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 IGKV1-9A0A0C4DH69 117 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 TUBGCP6Q96RT7 1819 aa13.97□□□□□ -0.17
TSPAN3-201ENST00000267970 GLRXP35754 106 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 FAM168AQ92567 244 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 TRAV8-3A0A0A6YYJ7 113 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 A0A1W2PRE2 83 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 UPK2O00526 184 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 RHOGP84095 191 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 KLRD1Q13241 179 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 RNF125Q96EQ8 232 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 RPUSD1Q9UJJ7 312 aaKnown RBP13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 D6R8Y8 96 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 AMBPP02760 352 aa13.96□□□□□ -0.17
TSPAN3-201ENST00000267970 C1orf53Q5VUE5 145 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 TMEM167AQ8TBQ9 72 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 RSPO3Q9BXY4 272 aaPredicted RBP13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 YAE1D1Q9NRH1 226 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 RGPD4Q7Z3J3 1758 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 ADAMTSL3P82987 1691 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 MORN2Q502X0 79 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 CHCHD5Q9BSY4 110 aa13.96□□□□□ -0.18
TSPAN3-201ENST00000267970 CCL1P22362 96 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 PSMG4Q5JS54 123 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 ESDP10768 282 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 HEPN1Q6WQI6 88 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 ABHD17AQ96GS6 310 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 GFI1Q99684 422 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 C1QTNF5Q9BXJ0 243 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 BCL6BQ8N143 479 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 ADARB2-AS1A8MUL3 147 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 GFRA3O60609 400 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 SSBP2P81877 361 aaPredicted RBP13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 Q8TAT8 98 aa13.95□□□□□ -0.18
TSPAN3-201ENST00000267970 TMEM8BA6NDV4 472 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 C15orf61A6NNL5 157 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 IFI27L1Q96BM0 104 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 UBE2CO00762 179 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 NBR2O15453 112 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 PMS2P5A8MQ11 134 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 DLEU1O43261 78 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 IGFBP3P17936 291 aaPredicted RBP13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 TOMM40O96008 361 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 GAGE2AQ6NT46 116 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 TRAV3A0A0B4J244 114 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 C2orf82Q6UX34 121 aa13.94□□□□□ -0.18
TSPAN3-201ENST00000267970 IFNL4K9M1U5 179 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 CRPP02741 224 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 PLNP26678 52 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 GUSBP1Q15486 140 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 ATP5L2Q7Z4Y8 100 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 APC2O95996 2303 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 VDAC2P45880 294 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 WBP1Q96G27 269 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 KLF17Q5JT82 389 aaPredicted RBP13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 PINLYPA6NC86 204 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 GLRX5Q86SX6 157 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 TIMM23O14925 209 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 RNF144BQ7Z419 303 aa13.93□□□□□ -0.18
TSPAN3-201ENST00000267970 TRBV6-7A0A0A0MS04 114 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 FOXG1P55316 489 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 TMEM144Q7Z5S9 345 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 ZNF581Q9P0T4 197 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 TCRBV4S1A1TA0A5B7 111 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 TEX38Q6PEX7 206 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 PAX4O43316 350 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 SP7Q8TDD2 431 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 RPL35AP18077 110 aaKnown RBP13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 UCNP55089 124 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 ZNF497Q6ZNH5 498 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 PAQR4Q8N4S7 273 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 INS-IGF2F8WCM5 200 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 INSP01308 110 aa13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 IGLV3-21P80748 117 aaPredicted RBP13.92□□□□□ -0.18
TSPAN3-201ENST00000267970 PAX1P15863 534 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 PSG3Q16557 428 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 MPV17L2Q567V2 206 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 PLSCR4Q9NRQ2 329 aa13.91□□□□□ -0.18
TSPAN3-201ENST00000267970 TM4SF5O14894 197 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms