RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 GGCTO75223 188 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 ZFP36P26651 326 aaKnown RBP10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 LGALS4P56470 323 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 HES1Q14469 280 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 MORN5Q5VZ52 161 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 C19orf35Q6ZS72 473 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 IMMP2LQ96T52 175 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 C12orf57Q99622 126 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 TCEAL7Q9BRU2 100 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 DCHS2Q6V1P9 2916 aa10.31□□□□□ -0.76
SPTLC1-201ENST00000262554 HELTA6NFD8 242 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 ZNF98A6NK75 572 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 NDUFA3O95167 84 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 TRGC1P0CF51 173 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 CRYBB3P26998 211 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 MEOX2P50222 304 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 SSX2Q16385 188 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 MINOS1Q5TGZ0 78 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 PERPQ96FX8 193 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 EAF1Q96JC9 268 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 BTF3L4Q96K17 158 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 PAXXQ9BUH6 204 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 MINOS1-NBL1R4GNA1 71 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 IGHV3-21A0A0B4J1V1 117 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 HOXB4P17483 251 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 HOXA5P20719 270 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 HNF1AP20823 631 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 SUMO1P63165 101 aaKnown RBP10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 LCN2P80188 198 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 RUSC1-AS1Q66K80 236 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 STXBP6Q8NFX7 210 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 OR10G8Q8NGN5 311 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 OR1B1Q8NGR6 318 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 FRZBQ92765 325 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 WNT10AQ9GZT5 417 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 SIRPDQ9H106 197 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 OR51M1Q9H341 326 aa10.3□□□□□ -0.76
SPTLC1-201ENST00000262554 ITPR1Q14643 2758 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 J3QL48 77 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 S100A9P06702 114 aaKnown RBP10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 ORM2P19652 201 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 GNG4P50150 75 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 FAM3BP58499 235 aaPredicted RBP10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 FXYD3Q14802 87 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 CLEC12BQ2HXU8 276 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 TEX38Q6PEX7 206 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 OR1L6Q8NGR2 347 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 DMRT1Q9Y5R6 373 aa10.29□□□□□ -0.76
SPTLC1-201ENST00000262554 I3L2K1 104 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 HYPMO75409 117 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 TYMSP04818 313 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 PYYP10082 97 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 CD24P25063 80 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 FOXL1Q12952 345 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 C5orf64Q2M2E5 130 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 CENPWQ5EE01 88 aa10.28□□□□□ -0.76
SPTLC1-201ENST00000262554 K7EN84 100 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 OVOL3O00110 214 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 PHOX2AO14813 284 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 TOX4O94842 621 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 SMIM6P0DI80 62 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 CDX1P47902 265 aaPredicted RBP10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 PLP1P60201 277 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 SGMS2Q8NHU3 365 aa10.27□□□□□ -0.76
SPTLC1-201ENST00000262554 TIGITQ495A1 244 aa10.27□□□□□ -0.77
SPTLC1-201ENST00000262554 IGFBPL1Q8WX77 278 aa10.27□□□□□ -0.77
SPTLC1-201ENST00000262554 FXYD5Q96DB9 178 aa10.27□□□□□ -0.77
SPTLC1-201ENST00000262554 BPESC1Q9GZL8 116 aa10.27□□□□□ -0.77
SPTLC1-201ENST00000262554 TBL2Q9Y4P3 447 aaKnown RBP10.27□□□□□ -0.77
SPTLC1-201ENST00000262554 NCBP2LA6PVI3 153 aaKnown RBP10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 FABP1P07148 127 aa10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 IGLC1P0CG04 106 aa10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 LMO4P61968 165 aa10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 DYNAPQ8N1N2 210 aa10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 RASL11BQ9BPW5 248 aa10.26□□□□□ -0.77
SPTLC1-201ENST00000262554 A0A0U1RQK1 487 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ZNF320A2RRD8 509 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 GOSR1O95249 250 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 UBE2E1P51965 193 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ERVFC1-1P60608 527 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 EBI3Q14213 229 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ZNF562Q6V9R5 426 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 FAM103A1Q9BTL3 118 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 GSX1Q9H4S2 264 aaPredicted RBP10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 HIGD1AQ9Y241 93 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 PSG1P11464 419 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 TMEM11P17152 192 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 PDLIM4P50479 330 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 CNN1P51911 297 aaKnown RBP10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ZNF329Q86UD4 541 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 Q8N6K4 173 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 ARPC1AQ92747 370 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 IL36BQ9NZH7 164 aa10.25□□□□□ -0.77
SPTLC1-201ENST00000262554 CACNA1AO00555 2505 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 PIEZO1Q92508 2521 aa10.24□□□□□ -0.77
SPTLC1-201ENST00000262554 TRAV9-1A0A075B6T8 112 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms