RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 ZNF319Q9P2F9 582 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 HOXA3O43365 443 aaPredicted RBP9.57□□□□□ -0.88
LAMA4-201ENST00000230538 IGKCP01834 107 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 OCC1Q8TAD7 63 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 GNB1LQ9BYB4 327 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 IGKV1D-8A0A087WSZ0 117 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 F8VVB4 439 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 F8VWA3 439 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 OVOL1O14753 267 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 PAQR4Q8N4S7 273 aaPredicted RBP9.57□□□□□ -0.88
LAMA4-201ENST00000230538 OR10W1Q8NGF6 305 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 OR2K2Q8NGT1 345 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 VGLL1Q99990 258 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 FNDC4Q9H6D8 234 aaPredicted RBP9.57□□□□□ -0.88
LAMA4-201ENST00000230538 ADARB2-AS1A8MUL3 147 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 PPBPP02775 128 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 ZNF688P0C7X2 276 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 CD33P20138 364 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 H0YIZ8 118 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 C3orf36Q3SXR2 165 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 FAM89BQ8N5H3 189 aa9.57□□□□□ -0.88
LAMA4-201ENST00000230538 C11orf68Q9H3H3 251 aaKnown RBP9.57□□□□□ -0.88
LAMA4-201ENST00000230538 F2Z2F3 143 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 PHLDA1Q8WV24 401 aaPredicted RBP9.56□□□□□ -0.88
LAMA4-201ENST00000230538 SCN10AQ9Y5Y9 1956 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 C11orf44Q8N8P7 122 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 TNFRSF14Q92956 283 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 CHCHD1Q96BP2 118 aaKnown RBP9.56□□□□□ -0.88
LAMA4-201ENST00000230538 GREB1Q4ZG55 1949 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 TRAV9-2A0A087WT02 112 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 TRAV5A0A0B4J249 113 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 E9PLN8 166 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 MESP1Q9BRJ9 268 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 DOCK4Q8N1I0 1966 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 SPTBP11277 2137 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 TRAV41A0A0B4J266 112 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 LINC00587B1AMM8 73 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 TSKUQ8WUA8 353 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 MBD3L1Q8WWY6 194 aa9.56□□□□□ -0.88
LAMA4-201ENST00000230538 IGHV3-64A0A075B6Q5 118 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 NAPSAO96009 420 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 ID3Q02535 119 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 ZNF415Q09FC8 603 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 VMO1Q7Z5L0 202 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 MLNRO43193 412 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 ZFP36L1Q07352 338 aaKnown RBP9.55□□□□□ -0.88
LAMA4-201ENST00000230538 CHCHD5Q9BSY4 110 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 MBNL3Q9NUK0 354 aaKnown RBP9.55□□□□□ -0.88
LAMA4-201ENST00000230538 MAP1BP46821 2468 aaKnown RBP9.55□□□□□ -0.88
LAMA4-201ENST00000230538 IGHV2-26A0A0B4J1V2 119 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 MPZP25189 248 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 PLNP26678 52 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 IGKV2-40A0A087WW87 121 aaPredicted RBP9.55□□□□□ -0.88
LAMA4-201ENST00000230538 IGKV2D-40P01614 121 aaPredicted RBP9.55□□□□□ -0.88
LAMA4-201ENST00000230538 LY6DQ14210 128 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 FOXF2Q12947 444 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 HEATR5BQ9P2D3 2071 aa9.55□□□□□ -0.88
LAMA4-201ENST00000230538 NPIPB5A8MRT5 1133 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 SPACA3Q8IXA5 215 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 SLC25A2Q9BXI2 301 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 SELENOKQ9Y6D0 94 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 TRAV8-4A0A0B4J246 113 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 CSRP1P21291 193 aaKnown RBP9.54□□□□□ -0.88
LAMA4-201ENST00000230538 SRSF7Q16629 238 aaKnown RBP eCLIP9.54□□□□□ -0.88
LAMA4-201ENST00000230538 WDR83OSQ9Y284 106 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 CRYGSP22914 178 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 TEX38Q6PEX7 206 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 ATP5L2Q7Z4Y8 100 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 FOXL1Q12952 345 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 LAGE3Q14657 143 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 PRR31Q5SQ13 230 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 DPH3P1Q9H4G8 78 aa9.54□□□□□ -0.88
LAMA4-201ENST00000230538 GZMBP10144 247 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 CFHR1Q03591 330 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 A0A0U1RRA0 63 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 TDGF1P3P51864 188 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 LINC00158P58513 81 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 ZNF672Q499Z4 452 aaPredicted RBP9.53□□□□□ -0.88
LAMA4-201ENST00000230538 TMEM200BQ69YZ2 307 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 TMEM86BQ8N661 226 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 ORAOV1Q8WV07 137 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 RPL15P61313 204 aaKnown RBP9.53□□□□□ -0.88
LAMA4-201ENST00000230538 SPAG8Q99932 426 aaPredicted RBP9.53□□□□□ -0.88
LAMA4-201ENST00000230538 MEGF9Q9H1U4 602 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 FGF16O43320 207 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 PRADC1Q9BSG0 188 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BKO60814 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BJP06899 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BOP23527 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BBP33778 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 GAS1P54826 345 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BDP58876 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 DSCR9P59020 149 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST1H2BCP62807 126 aa9.53□□□□□ -0.88
LAMA4-201ENST00000230538 HIST2H2BEQ16778 126 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms