RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 TRGV11A0A075B6L2 103 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 C17orf98A8MV24 154 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 DUSP14O95147 198 aaKnown RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 IFI27P40305 119 aaPredicted RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 FOXL2NBQ6ZUU3 175 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 TMEM160Q9NX00 188 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 PEMTQ9UBM1 199 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 PCNX3Q9H6A9 2034 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 TRAV24A0A0B4J272 114 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 TRAV21A0A0B4J279 112 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 LOC101059948A0A1B0GTJ6 334 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 UMODP07911 640 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 CD69Q07108 199 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 MRAP2Q96G30 205 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 DERL1Q9BUN8 251 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 SEMA5BQ9P283 1151 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 COL4A6Q14031 1691 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 A0A1B0GWJ7 208 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 CECR9P0C854 216 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 AKIRIN1Q9H9L7 192 aaPredicted RBP3.68□□□□□ -1.82
CHD9-201ENST00000219084 TMSB15BA0A087X1C1 80 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 PRSS2P07478 247 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 SUPT4H1P63272 117 aaKnown RBP3.68□□□□□ -1.82
CHD9-201ENST00000219084 TMEM249Q2WGJ8 235 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 RPL39P5Q59GN2 51 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 SPRED2Q7Z698 418 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 A0A1B0GWB2 263 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 A0A1W2PRS3 328 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 HOXA3O43365 443 aaPredicted RBP3.68□□□□□ -1.82
CHD9-201ENST00000219084 AMBPP02760 352 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 REG1AP05451 166 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 C21orf62-AS1Q17RA5 79 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 MINOS1Q5TGZ0 78 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 RNF125Q96EQ8 232 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 C20orf144Q9BQM9 153 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 TMEM133Q9H2Q1 129 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 MINOS1-NBL1R4GNA1 71 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 APOMO95445 188 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 LINC01551Q86U37 167 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 CRIPAKQ8N1N5 446 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 TMEM75Q8N9X5 138 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 NUP37Q8NFH4 326 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 PCNX1Q96RV3 2341 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 SAA1P0DJI8 122 aaPredicted RBP3.68□□□□□ -1.82
CHD9-201ENST00000219084 FOXC1Q12948 553 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 ATRAIDQ6UW56 229 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 VKORC1L1Q8N0U8 176 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 A0A0A6YYD4 124 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 K7EMI3 77 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 CNTFRP26992 372 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 LINC01545Q5VT33 79 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 ZNF826PQ6ZT77 177 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 NUDT11Q96G61 164 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 FOXC2Q99958 501 aa3.68□□□□□ -1.82
CHD9-201ENST00000219084 CNOT1A5YKK6 2376 aaKnown RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 IGKV1-9A0A0C4DH69 117 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 C17orf100A8MU93 164 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 RAMP3O60896 148 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 SAMD5Q5TGI4 173 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 CCL19Q99731 98 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 HILPDAQ9Y5L2 63 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 F11RQ9Y624 299 aaKnown RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 FOXI3A8MTJ6 420 aaPredicted RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 H0YIZ8 118 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ETV2O00321 342 aaPredicted RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 GAGE13Q4V321 117 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 MORN3Q6PF18 240 aaPredicted RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 PPP1R27Q86WC6 154 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 COQ2Q96H96 371 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 LYZL4Q96KX0 146 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 WNT10AQ9GZT5 417 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ZDBF2Q9HCK1 2354 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 EMP1P54849 157 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 DSCR9P59020 149 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ZNF585BQ52M93 769 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 STPG1Q5TH74 334 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ZFAND6Q6FIF0 208 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 TREML4Q6UXN2 200 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 OR13A1Q8NGR1 328 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ZNF492Q9P255 531 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ACACAQ13085 2346 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 A0A1W2PPE3 182 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 SRRM5B3KS81 715 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 M0R1W7 72 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 SLC25A20O43772 301 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 MIR17HGQ75NE6 70 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 DLX4Q92988 240 aaPredicted RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 NABP1Q96AH0 204 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 PLEKHB2Q96CS7 222 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 PNRC2Q9NPJ4 139 aaKnown RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 PTPRBP23467 1997 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 A8MWV9 139 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 CRXO43186 299 aaPredicted RBP3.67□□□□□ -1.82
CHD9-201ENST00000219084 TOMM40O96008 361 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 ATP5G3P48201 142 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 PSG7Q13046 419 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 MEIG1Q5JSS6 88 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 TMEM170BQ5T4T1 132 aa3.67□□□□□ -1.82
CHD9-201ENST00000219084 DUX5Q96PT3 197 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms