RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 HTR2BP41595 481 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 Q6ZWC4 215 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 MCFD2Q8NI22 146 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 OVOL2Q9BRP0 275 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 HEYLQ9NQ87 328 aaPredicted RBP14.1□□□□□ -0.15
CLN6-221ENST00000637494 MCUBQ9NWR8 336 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 TP53TG1Q9Y2A0 90 aa14.1□□□□□ -0.15
CLN6-221ENST00000637494 PUS1Q9Y606 427 aaKnown RBP eCLIP14.1□□□□□ -0.15
CLN6-221ENST00000637494 IGKV3-7A0A075B6H7 116 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 KIR2DL5BA0A0G2JN68 375 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 KIR2DL5BA0A0G2JPC4 375 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 CEBPZOSA8MTT3 80 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 H3BMQ9 156 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 FAUP35544 74 aaKnown RBP14.09□□□□□ -0.15
CLN6-221ENST00000637494 TFPI2P48307 235 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 ODF3L2Q3SX64 289 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 TOMM20LQ6UXN7 152 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 SELENOHQ8IZQ5 122 aaKnown RBP14.09□□□□□ -0.15
CLN6-221ENST00000637494 KIR2DL5AQ8N109 375 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 KIR2DL5BQ8NHK3 375 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 NARS2Q96I59 477 aaKnown RBP14.09□□□□□ -0.15
CLN6-221ENST00000637494 CACNG5Q9UF02 275 aa14.09□□□□□ -0.15
CLN6-221ENST00000637494 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 TRAV30A0A087WSZ9 112 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 A0A1W2PS18 150 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 DNASE2O00115 360 aaPredicted RBP14.08□□□□□ -0.16
CLN6-221ENST00000637494 SPRY2O43597 315 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 CLN5O75503 358 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 JTBO76095 146 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 PVRIGQ6DKI7 326 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 TCF24Q7RTU0 167 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 NOXA1Q86UR1 476 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 IL22RA2Q969J5 263 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 TMEM230Q96A57 120 aa14.08□□□□□ -0.16
CLN6-221ENST00000637494 SLIRPQ9GZT3 109 aaKnown RBP14.08□□□□□ -0.16
CLN6-221ENST00000637494 PIGBOS1A0A0B4J2F0 54 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 CCDC160A6NGH7 325 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 ANXA3P12429 323 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 RPL35AP18077 110 aaKnown RBP14.07□□□□□ -0.16
CLN6-221ENST00000637494 NPPCP23582 126 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 TNFSF8P32971 234 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 AP3S2P59780 193 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 RPL11P62913 178 aaKnown RBP14.07□□□□□ -0.16
CLN6-221ENST00000637494 AARDQ4LEZ3 155 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 Q6ZRM9 215 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 GBGT1Q8N5D6 347 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 OR4X1Q8NH49 305 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 LHFPL5Q8TAF8 219 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 GPR146Q96CH1 333 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 TMEM56-RWDD3S4R434 201 aa14.07□□□□□ -0.16
CLN6-221ENST00000637494 SULT1A3P0DMM9 295 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 SULT1A4P0DMN0 295 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 DEFB135Q30KP9 77 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 BSXQ3C1V8 233 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 ETFRF1Q6IPR1 90 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 WFDC3Q8IUB2 231 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 METTL26Q96S19 204 aa14.06□□□□□ -0.16
CLN6-221ENST00000637494 SLC25A4P12235 298 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 AKR1C4P17516 323 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 S100A5P33763 92 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 SRPXP78539 464 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 C2orf83Q53S99 150 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 APRG1Q8IVJ8 170 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 SLC24A4Q8NFF2 622 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 RNASEH2CQ8TDP1 164 aaKnown RBP14.05□□□□□ -0.16
CLN6-221ENST00000637494 ST8SIA2Q92186 375 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 GRAMD2BQ96HH9 432 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 ZNF414Q96IQ9 312 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 FNDC4Q9H6D8 234 aaPredicted RBP14.05□□□□□ -0.16
CLN6-221ENST00000637494 VSIRQ9H7M9 311 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 ZFAND3Q9H8U3 227 aa14.05□□□□□ -0.16
CLN6-221ENST00000637494 TMEM187Q14656 261 aa14.04□□□□□ -0.16
CLN6-221ENST00000637494 PYDC2Q56P42 97 aa14.04□□□□□ -0.16
CLN6-221ENST00000637494 FAM90A2PQ658T7 463 aa14.04□□□□□ -0.16
CLN6-221ENST00000637494 MAP6D1Q9H9H5 199 aa14.04□□□□□ -0.16
CLN6-221ENST00000637494 TRAV2A0A0B4J234 112 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 IGHV3-66A0A0C4DH42 116 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 A0A1B0GU03 582 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 DFFBO76075 338 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 EIF2B2P49770 351 aaKnown RBP14.03□□□□□ -0.16
CLN6-221ENST00000637494 CCR6P51684 374 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 MLANAQ16655 118 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 LGI3Q8N145 548 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 TOMM5Q8N4H5 51 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 TMEM217Q8N7C4 229 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 OR1S2Q8NGQ3 325 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 Q8WTZ3 238 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 RNF183Q96D59 192 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 RABAC1Q9UI14 185 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 RYR3Q15413 4870 aa14.03□□□□□ -0.16
CLN6-221ENST00000637494 A0A0B4J2A0 478 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 MPTX1A8MV57 137 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 NXPH3O95157 252 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 IFNA10P01566 189 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 APOHP02749 345 aaPredicted RBP14.02□□□□□ -0.17
CLN6-221ENST00000637494 NPY1RP25929 384 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 LYG2Q86SG7 212 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 SOSTQ9BQB4 213 aa14.02□□□□□ -0.17
CLN6-221ENST00000637494 CSTL1Q9H114 145 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms