RNA–Protein interactions for RNA: ENST00000636483.1

SPTAN1-232, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 100 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-232ENST00000636483 TONSLQ96HA7 1378 aa0.8□□□□□ -2.28
SPTAN1-232ENST00000636483 RIC1Q4ADV7 1423 aa0.8□□□□□ -2.28
SPTAN1-232ENST00000636483 MIA2Q96PC5 1412 aa0.8□□□□□ -2.28
SPTAN1-232ENST00000636483 ADGRL3Q9HAR2 1447 aa0.8□□□□□ -2.28
SPTAN1-232ENST00000636483 MED1Q15648 1581 aaPredicted RBP0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 HEATR5AQ86XA9 2040 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 SORL1Q92673 2214 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 TRAV3A0A0B4J244 114 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 IGKV1-9A0A0C4DH69 117 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 HMGB3O15347 200 aaKnown RBP0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 IFNA10P01566 189 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 PRB1P04280 392 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 SERPINE1P05121 402 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 CTSDP07339 412 aaPredicted RBP0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 CST2P09228 141 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 HOXA6P31267 233 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 FXYD2P54710 66 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 ZNF846Q147U1 533 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 Q1T7F1 81 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 IAH1Q2TAA2 248 aaPredicted RBP0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 LINC01554Q52M75 96 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 OOSP2Q86WS3 158 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 C12orf45Q8N5I9 185 aaPredicted RBP0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 OR4E2Q8NGC2 313 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 OR10X1Q8NGY0 326 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 WFDC5Q8TCV5 224 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 AQP3Q92482 292 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 SLC50A1Q9BRV3 221 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 C9orf16Q9BUW7 83 aa0.79□□□□□ -2.28
SPTAN1-232ENST00000636483 CCDC88CQ9P219 2028 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 MEIKINA0A087WXM9 373 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 IGKV2-29A2NJV5 120 aaPredicted RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 TRAPPC13A5PLN9 417 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 OR7C1O76099 320 aaPredicted RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 C8GP07360 202 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 RPSAP08865 295 aaKnown RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 HTR1AP08908 422 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 ASAH2BP0C7U1 165 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 METTL15P1P0C7V9 234 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 S100A4P26447 101 aaKnown RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 ERP29P30040 261 aaKnown RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 HIST1H3AP68431 136 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 BASP1P80723 227 aaKnown RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 H3F3AP84243 136 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 CDK5R1Q15078 307 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 SURF2Q15527 256 aaPredicted RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 HACD4Q5VWC8 232 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 Q6ZQT0 140 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 ZNF826PQ6ZT77 177 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 GPR146Q96CH1 333 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 ADAT3Q96EY9 351 aaPredicted RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 BTF3L4Q96K17 158 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 CEP19Q96LK0 163 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 PHB2Q99623 299 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 ADAT1Q9BUB4 502 aaKnown RBP0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 YIPF3Q9GZM5 350 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 PSTPIP2Q9H939 334 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 OSTCQ9NRP0 149 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 OPTCQ9UBM4 332 aa0.78□□□□□ -2.28
SPTAN1-232ENST00000636483 RIMBP3CA6NJZ7 1639 aa0.78□□□□□ -2.29
SPTAN1-232ENST00000636483 RIMBP3BA6NNM3 1639 aa0.78□□□□□ -2.29
SPTAN1-232ENST00000636483 RIMBP3Q9UFD9 1639 aa0.78□□□□□ -2.29
SPTAN1-232ENST00000636483 CR1P17927 2039 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 MDC1Q14676 2089 aaKnown RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 TRAV4A0A0B4J268 109 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 CYB5BO43169 146 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 OR5F1O95221 314 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 MGST1P10620 155 aaKnown RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 PPIBP23284 216 aaKnown RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 CASP1P29466 404 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 SSR2P43308 183 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 ATP5G3P48201 142 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 PIGPP57054 158 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 RHOBP62745 196 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 TMED2Q15363 201 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 RHEBQ15382 184 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 RNASE10Q5GAN6 216 aaKnown RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 C10orf55Q5SWW7 151 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 DPPA3Q6W0C5 159 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 LCA10Q71F78 164 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 TRAPPC6BQ86SZ2 158 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 Q8N2B8 174 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 PXT1Q8NFP0 134 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 NAA38Q9BRA0 125 aaKnown RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 REG4Q9BYZ8 158 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 C20orf27Q9GZN8 174 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 NMNAT1Q9HAN9 279 aaPredicted RBP0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 ARMC1Q9NVT9 282 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 MED29Q9NX70 200 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 NUP210LQ5VU65 1888 aa0.77□□□□□ -2.29
SPTAN1-232ENST00000636483 DOCK10Q96BY6 2186 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 MICAL3Q7RTP6 2002 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 LAMB2P55268 1798 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 ARHGEF28Q8N1W1 1705 aaKnown RBP0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 A0A087X0T9 212 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 C2orf70A6NJV1 201 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 J3QRK9 145 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 CST8O60676 142 aa0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 RNASE3P12724 160 aaKnown RBP0.76□□□□□ -2.29
SPTAN1-232ENST00000636483 PPP1R2P41236 205 aa0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms