RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 EWSR1Q01844 656 aaKnown RBP eCLIP15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 BAXQ07812 192 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 MLANAQ16655 118 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 OR8G2PQ6IF36 304 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 ZNF343Q6P1L6 599 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 OR10P1Q8NGE3 313 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 ZNF502Q8TBZ5 544 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 EEF1AKMT3Q96AZ1 226 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 ATP6V0BQ99437 205 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 GNB4Q9HAV0 340 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 C21orf62Q9NYP8 219 aa15.35■□□□□ 0.05
PDLIM2-221ENST00000622702 FXYD6-FXYD2A0A087WZ82 144 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 TRBV7-1A0A0A6YYK4 115 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 IGHV3-21A0A0B4J1V1 117 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 RPL12P30050 165 aaKnown RBP15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 ARL16Q0P5N6 197 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 KHDC1LQ5JSQ8 128 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 FAM209BQ5JX69 171 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 SLC16A13Q7RTY0 426 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 ZNF546Q86UE3 836 aa15.34■□□□□ 0.05
PDLIM2-221ENST00000622702 IGHV3-11P01762 117 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 LGALS1P09382 135 aaKnown RBP15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 RUNX1Q01196 453 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 NSUN5P1Q3KNT7 163 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 PRR31Q5SQ13 230 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 NDUFA11Q86Y39 141 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 C4orf3Q8WVX3 66 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 CCDC140Q96MF4 163 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 AQP10Q96PS8 301 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 TXN2Q99757 166 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 GGACTQ9BVM4 153 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 TNFSF18Q9UNG2 199 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 S4R3C0 116 aa15.33■□□□□ 0.05
PDLIM2-221ENST00000622702 ADARB2-AS1A8MUL3 147 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 FNDC10F2Z333 226 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 F8W735 103 aaPredicted RBP15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 IGHV3-48P01763 117 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 MFAP4P55083 255 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 HBG1P69891 147 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 HBG2P69892 147 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 DLK1P80370 383 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 NHLH2Q02577 135 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 CD300CQ08708 224 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 ACOT7LQ6ZUV0 252 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 TMEM217Q8N7C4 229 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 TMEM116Q8NCL8 245 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 OR11H4Q8NGC9 324 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 OR4X1Q8NH49 305 aa15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 MRPL36Q9P0J6 103 aaKnown RBP15.33■□□□□ 0.04
PDLIM2-221ENST00000622702 CMYA5Q8N3K9 4069 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 HMSDA8MTL9 139 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 I3L521 148 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 C1QBP02746 253 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 S100A11P31949 105 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 NUP62P37198 522 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 SLC38A11Q08AI6 406 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 ACSM6Q6P461 480 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 C18orf65Q6ZTR6 163 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 INO80EQ8NBZ0 244 aaPredicted RBP15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 KLHL30-AS1Q8NEE0 82 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 SLC35E1Q96K37 410 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 GAR1Q9NY12 217 aaKnown RBP15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 HSPB11Q9Y547 144 aa15.32■□□□□ 0.04
PDLIM2-221ENST00000622702 A0A1W2PRX2 142 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 RNF222A6NCQ9 220 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 TSPAN15O95858 294 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 IGHV3-23P01764 117 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 NPBWR1P48145 328 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 GAMTQ14353 236 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 OR5B12Q96R08 314 aa15.31■□□□□ 0.04
PDLIM2-221ENST00000622702 NUDT19A8MXV4 375 aa15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 RND2P52198 227 aa15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 CLEC19AQ6UXS0 136 aa15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 ZC4H2Q9NQZ6 224 aa15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 PEF1Q9UBV8 284 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 NBEAL1Q6ZS30 2694 aa15.3■□□□□ 0.04
PDLIM2-221ENST00000622702 ARPC5O15511 151 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 CLN5O75503 358 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 CLEC3BP05452 202 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 ATP6V1FQ16864 119 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 VWC2Q2TAL6 325 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 Q56UQ5 140 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 TREML4Q6UXN2 200 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 UBAC2Q8NBM4 344 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 OR1S2Q8NGQ3 325 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 OR5C1Q8NGR4 320 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 NPIPB3Q92617 1050 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 BSCL2Q96G97 398 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 ACY3Q96HD9 319 aa15.29■□□□□ 0.04
PDLIM2-221ENST00000622702 TRBV12-3P01733 135 aa15.28■□□□□ 0.04
PDLIM2-221ENST00000622702 GPR183P32249 361 aa15.28■□□□□ 0.04
PDLIM2-221ENST00000622702 LILRB2Q8N423 598 aa15.28■□□□□ 0.04
PDLIM2-221ENST00000622702 TMEM147Q9BVK8 224 aa15.28■□□□□ 0.04
PDLIM2-221ENST00000622702 ANKRD34BA5PLL1 514 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 OR2T8A6NH00 312 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 TGOLN2O43493 480 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 GNG7O60262 68 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 PFDN1O60925 122 aa15.27■□□□□ 0.04
PDLIM2-221ENST00000622702 HSPB1P04792 205 aaKnown RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms