RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 PRRT1Q99946 306 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 SOSTQ9BQB4 213 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 PRR13Q9NZ81 148 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 CACNG5Q9UF02 275 aa12.72□□□□□ -0.37
HMGN3-203ENST00000620514 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
HMGN3-203ENST00000620514 LYSTQ99698 3801 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 A0A1B0GU03 582 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 NOL3O60936 208 aaKnown RBP12.71□□□□□ -0.37
HMGN3-203ENST00000620514 RPL35AP18077 110 aaKnown RBP12.71□□□□□ -0.37
HMGN3-203ENST00000620514 SPCS3P61009 180 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 DHODHQ02127 395 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 ZNF124Q15973 351 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 BSXQ3C1V8 233 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 AARDQ4LEZ3 155 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 TMEM268Q5VZI3 342 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 ZNF600Q6ZNG1 722 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 APRG1Q8IVJ8 170 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 FAM219AQ8IW50 185 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 LILRB2Q8N423 598 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 GBGT1Q8N5D6 347 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 ST8SIA2Q92186 375 aa12.71□□□□□ -0.37
HMGN3-203ENST00000620514 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.71□□□□□ -0.37
HMGN3-203ENST00000620514 RSL24D1Q9UHA3 163 aaKnown RBP12.71□□□□□ -0.37
HMGN3-203ENST00000620514 IGHV3-66A0A0C4DH42 116 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 FABP12A6NFH5 140 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 CORTO00230 105 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 OPRK1P41145 380 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 DEFB135Q30KP9 77 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 OR52E5Q8NH55 327 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 MCFD2Q8NI22 146 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 GINS3Q9BRX5 216 aa12.7□□□□□ -0.38
HMGN3-203ENST00000620514 CLN5O75503 358 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 NXPH3O95157 252 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 APOC4P55056 127 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 TMEM187Q14656 261 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 TCF24Q7RTU0 167 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 IL17DQ8TAD2 202 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 MCUBQ9NWR8 336 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 TMEM56-RWDD3S4R434 201 aa12.69□□□□□ -0.38
HMGN3-203ENST00000620514 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 Q6ZWC4 215 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 WFDC3Q8IUB2 231 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 OR4X1Q8NH49 305 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 GALNT14Q96FL9 552 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 HEYLQ9NQ87 328 aaPredicted RBP12.68□□□□□ -0.38
HMGN3-203ENST00000620514 SCP2D1Q9UJQ7 156 aa12.68□□□□□ -0.38
HMGN3-203ENST00000620514 CEBPZOSA8MTT3 80 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 SPRY2O43597 315 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 DFFBO76075 338 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 HTR2BP41595 481 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 EWSR1Q01844 656 aaKnown RBP eCLIP12.67□□□□□ -0.38
HMGN3-203ENST00000620514 TIGITQ495A1 244 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 STPG3Q8N7X2 389 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 TMEM170AQ8WVE7 144 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 MAP6D1Q9H9H5 199 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 TP53TG1Q9Y2A0 90 aa12.67□□□□□ -0.38
HMGN3-203ENST00000620514 PLECQ15149 4684 aaKnown RBP12.67□□□□□ -0.38
HMGN3-203ENST00000620514 KIR2DL5BA0A0G2JN68 375 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 KIR2DL5BA0A0G2JPC4 375 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 A0A0J9YWU9 116 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 UBE2CO00762 179 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 IGKV1-17P01599 117 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 AKR1C4P17516 323 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
HMGN3-203ENST00000620514 C2orf83Q53S99 150 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 KIR2DL5AQ8N109 375 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 SLC24A4Q8NFF2 622 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 KIR2DL5BQ8NHK3 375 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 MS4A6AQ9H2W1 248 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 KCNIP3Q9Y2W7 256 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 HYDINQ4G0P3 5121 aa12.66□□□□□ -0.38
HMGN3-203ENST00000620514 SULT1A3P0DMM9 295 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 SULT1A4P0DMN0 295 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 BMI1P35226 326 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 KLF9Q13886 244 aaPredicted RBP12.65□□□□□ -0.38
HMGN3-203ENST00000620514 PRSS54Q6PEW0 395 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 LYZL2Q7Z4W2 148 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 LYG2Q86SG7 212 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 TRIM63Q969Q1 353 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 RNF183Q96D59 192 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
HMGN3-203ENST00000620514 RPS10-NUDT3A0A1W2PQS6 291 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 NPPCP23582 126 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 RND2P52198 227 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 CMC4P56277 68 aaPredicted RBP12.64□□□□□ -0.39
HMGN3-203ENST00000620514 RPL11P62913 178 aaKnown RBP12.64□□□□□ -0.39
HMGN3-203ENST00000620514 PAFAH1B2P68402 229 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 PYDC2Q56P42 97 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 FAM24BQ8N5W8 94 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 V9GYH0 126 aa12.64□□□□□ -0.39
HMGN3-203ENST00000620514 CCDC160A6NGH7 325 aa12.63□□□□□ -0.39
HMGN3-203ENST00000620514 DNASE2O00115 360 aaPredicted RBP12.63□□□□□ -0.39
HMGN3-203ENST00000620514 CD5P06127 495 aa12.63□□□□□ -0.39
HMGN3-203ENST00000620514 IGLC1P0CG04 106 aa12.63□□□□□ -0.39
HMGN3-203ENST00000620514 NPY1RP25929 384 aa12.63□□□□□ -0.39
HMGN3-203ENST00000620514 RBMS2Q15434 407 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms