RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 SPRY2O43597 315 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 JTBO76095 146 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 OR5AC1P0C628 307 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 FAM90A2PQ658T7 463 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 SCGB3A2Q96PL1 93 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 RSL24D1Q9UHA3 163 aaKnown RBP14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 GPR132Q9UNW8 380 aa14.14□□□□□ -0.15
CCDC28A-203ENST00000617445 STARD9Q9P2P6 4700 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 GSTZ1O43708 216 aaPredicted RBP14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 HTR2BP41595 481 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 BSXQ3C1V8 233 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 OR4C16Q8NGL9 310 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 OR4X1Q8NH49 305 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 TMEM231Q9H6L2 316 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 VSIRQ9H7M9 311 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 LYSTQ99698 3801 aa14.13□□□□□ -0.15
CCDC28A-203ENST00000617445 TRAV30A0A087WSZ9 112 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 A0A0G2JRQ6 117 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 CRYM-AS1A6NIL9 109 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 CLN5O75503 358 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 FAAP20Q6NZ36 180 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 Q6ZRM9 215 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 SELENOHQ8IZQ5 122 aaKnown RBP14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 RNF183Q96D59 192 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 MAP6D1Q9H9H5 199 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 SCP2D1Q9UJQ7 156 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 KCNIP3Q9Y2W7 256 aa14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 PUS1Q9Y606 427 aaKnown RBP eCLIP14.12□□□□□ -0.15
CCDC28A-203ENST00000617445 IGHV3-49A0A0A0MS15 119 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 TRAV2A0A0B4J234 112 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 RPS10-NUDT3A0A1W2PQS6 291 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 A0A1W2PS18 150 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 ANKRD20A5PA0PJZ0 165 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 ATF4P18848 351 aaPredicted RBP14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 OPRK1P41145 380 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 TNFRSF9Q07011 255 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 TCF24Q7RTU0 167 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 OR51S1Q8NGJ8 323 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 IL22RA2Q969J5 263 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 SLIRPQ9GZT3 109 aaKnown RBP14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 TMEM56-RWDD3S4R434 201 aa14.11□□□□□ -0.15
CCDC28A-203ENST00000617445 DFFBO76075 338 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 NPPCP23582 126 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 DEFB135Q30KP9 77 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 TMEM268Q5VZI3 342 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 NOXA1Q86UR1 476 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 LHFPL5Q8TAF8 219 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 FNDC4Q9H6D8 234 aaPredicted RBP14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 ZFAND3Q9H8U3 227 aa14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 HEYLQ9NQ87 328 aaPredicted RBP14.1□□□□□ -0.15
CCDC28A-203ENST00000617445 PIGBOS1A0A0B4J2F0 54 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 CCDC160A6NGH7 325 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 RPL35AP18077 110 aaKnown RBP14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 TFPI2P48307 235 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 C2orf83Q53S99 150 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 TMEM217Q8N7C4 229 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 RNASEH2CQ8TDP1 164 aaKnown RBP14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 ST8SIA2Q92186 375 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 GPR146Q96CH1 333 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 CSTL1Q9H114 145 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 CACNG5Q9UF02 275 aa14.09□□□□□ -0.15
CCDC28A-203ENST00000617445 IGHV3OR16-13A0A075B7E8 117 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 IGHV3-74A0A0B4J1X5 117 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 A0A1B0GU03 582 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 DNASE2O00115 360 aaPredicted RBP14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 SLC25A4P12235 298 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 APRG1Q8IVJ8 170 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 GBGT1Q8N5D6 347 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 MCFD2Q8NI22 146 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 TMEM230Q96A57 120 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 NARS2Q96I59 477 aaKnown RBP14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 METTL26Q96S19 204 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 SOSTQ9BQB4 213 aa14.08□□□□□ -0.16
CCDC28A-203ENST00000617445 SACSQ9NZJ4 4579 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 IGKV3-7A0A075B6H7 116 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 A0A0J9YWU9 116 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 FABP12A6NFH5 140 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 MPTX1A8MV57 137 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 CRYBB3P26998 211 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 TNFSF8P32971 234 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 ETFRF1Q6IPR1 90 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 GATAD1Q8WUU5 269 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 MS4A6AQ9H2W1 248 aa14.07□□□□□ -0.16
CCDC28A-203ENST00000617445 CEBPZOSA8MTT3 80 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 ZNF701M0R085 212 aaPredicted RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 APOHP02749 345 aaPredicted RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 SULT1A3P0DMM9 295 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 SULT1A4P0DMN0 295 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 FAUP35544 74 aaKnown RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 TMEM187Q14656 261 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 MLANAQ16655 118 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 SLC24A4Q8NFF2 622 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 OR1S2Q8NGQ3 325 aa14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 RBM38Q9H0Z9 239 aaKnown RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 MRPL36Q9P0J6 103 aaKnown RBP14.06□□□□□ -0.16
CCDC28A-203ENST00000617445 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
CCDC28A-203ENST00000617445 IGKV1-17P01599 117 aa14.05□□□□□ -0.16
CCDC28A-203ENST00000617445 ANXA3P12429 323 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms