RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 AURKAIP1Q9NWT8 199 aaPredicted RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 DMRT1Q9Y5R6 373 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 IGHV4-30-2A0A087WSY4 118 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 A0A0B4J2A0 478 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 UPK1BO75841 260 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNF705BP0CI00 300 aaPredicted RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 PGLYRP3Q96LB9 341 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 CACNA1IQ9P0X4 2223 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 CD37P11049 281 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SLC17A2O00624 439 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 DUX4L9Q6RFH8 374 aaPredicted RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 FAM216BQ8N7L0 139 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 RNF133Q8WVZ7 376 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 C5orf52A6NGY3 159 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 FOXI3A8MTJ6 420 aaPredicted RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 FAM78BQ5VT40 261 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 A0A087WWC5 75 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 DIRC3C9JPN6 131 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 NPIPB8E9PQR5 432 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 NPIPB9F8W1W9 429 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 NPIPB7O75200 414 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 HLA-DRB1P01911 266 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 UBE2E2Q96LR5 201 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 TRBV7-9A0A0J9YWB2 115 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 PQLC2Q6ZP29 291 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 MBD3L1Q8WWY6 194 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 F8VVB4 439 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 F8VWA3 439 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 REG3GQ6UW15 175 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 RBM45Q8IUH3 476 aaKnown RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 TRBV5-3A0A0A0MS03 114 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 A0A1W2PPV9 198 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SCGB1A1P11684 91 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 IL11P20809 199 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 RPS11P62280 158 aaKnown RBP eCLIP2.75□□□□□ -1.97
LPP-220ENST00000617246 FAM156AQ8NDB6 213 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 OR52E5Q8NH55 327 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 AMELYQ99218 206 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 TMEM204Q9BSN7 226 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNF747Q9BV97 191 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SMIM9A6NGZ8 99 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 A8MWV9 139 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 C11orf42Q8N5U0 333 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 WIPF2Q8TF74 440 aaPredicted RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 CACNG8Q8WXS5 425 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SPXQ9BT56 116 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SIGLEC9Q9Y336 463 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 HMX2A2RU54 273 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 EDN2P20800 178 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 HCCSP53701 268 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 MRPL54Q6P161 138 aaKnown RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 SMIM3Q9BZL3 60 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 TRBV4-1A0A0J9YWV2 114 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 HSBP1O75506 76 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 MZB1Q8WU39 189 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 EBF4Q9BQW3 602 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNRD1Q9P1U0 126 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 CST4P01036 141 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SRSF2Q01130 221 aaKnown RBP2.75□□□□□ -1.97
LPP-220ENST00000617246 ERCC8Q13216 396 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNRF1Q8ND25 227 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ASCL2Q99929 193 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 PLAUP00749 431 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ARL14EPLP0DKL9 152 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 MST1P26927 711 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 SYNJ2BPP57105 145 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 KLRD1Q13241 179 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 OR10C1Q96KK4 312 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 NAT8Q9UHE5 227 aa2.75□□□□□ -1.97
LPP-220ENST00000617246 ZNF124Q15973 351 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 C15orf32Q32M92 178 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 NAA50Q9GZZ1 169 aaKnown RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 IL36RNQ9UBH0 155 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 SDK1Q7Z5N4 2213 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 IGHV4-31P0DP07 118 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PCNX2A6NKB5 2137 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 INMT-MINDY4F8WBC2 141 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TGFBR3LH3BV60 316 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 PRNTQ86SH4 94 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZNF48Q96MX3 618 aaPredicted RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 BUB1B-PAK6H3BSN5 160 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMEM128Q5BJH2 165 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZNF431Q8TF32 576 aaPredicted RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 OVOL2Q9BRP0 275 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMEM70Q9BUB7 260 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 A0A1B0GV50 99 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZFAND6Q6FIF0 208 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 TMEM129A0AVI4 362 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 ZNF701M0R085 212 aaPredicted RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 PHOX2AO14813 284 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 LYRM1O43325 122 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CDS2O95674 445 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 IGHV3-7P01780 117 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 MIFP14174 115 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CEBPDP49716 269 aaPredicted RBP2.74□□□□□ -1.97
LPP-220ENST00000617246 MAJINQ3KP22 176 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 CLEC2DQ9UHP7 191 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 KBTBD11-OT1A0A1B0GTJ5 212 aa2.74□□□□□ -1.97
LPP-220ENST00000617246 MBPP02686 304 aaPredicted RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms