RNA–Protein interactions for RNA: ENST00000616550.4

CBWD3-212, Transcript of COBW domain containing 3, humanhuman

TSL 2 BASIC

Gene CBWD3, Length 721 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-212ENST00000616550 HAGHQ16775 308 aa16.64■□□□□ 0.25
CBWD3-212ENST00000616550 BSXQ3C1V8 233 aa16.64■□□□□ 0.25
CBWD3-212ENST00000616550 LYZL2Q7Z4W2 148 aa16.64■□□□□ 0.25
CBWD3-212ENST00000616550 DEFB125Q8N687 156 aa16.64■□□□□ 0.25
CBWD3-212ENST00000616550 HIPK2Q9H2X6 1198 aa16.64■□□□□ 0.25
CBWD3-212ENST00000616550 NXPH3O95157 252 aa16.63■□□□□ 0.25
CBWD3-212ENST00000616550 SMCO1Q147U7 214 aa16.63■□□□□ 0.25
CBWD3-212ENST00000616550 SCGB2A1O75556 95 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 TMEM50AO95807 157 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 VAMP1P23763 118 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 BAK1Q16611 211 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 C2orf83Q53S99 150 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 NMSQ5H8A3 153 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 TMEM116Q8NCL8 245 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 OR10C1Q96KK4 312 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 SPAG8Q99932 426 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-212ENST00000616550 WFDC10AQ9H1F0 79 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 FNDC4Q9H6D8 234 aaPredicted RBP16.62■□□□□ 0.25
CBWD3-212ENST00000616550 SRD5A3Q9H8P0 318 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 SMPXQ9UHP9 88 aa16.62■□□□□ 0.25
CBWD3-212ENST00000616550 TRAV14DV4A0A0A6YYC5 116 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 RPS10-NUDT3A0A1W2PQS6 291 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 NAP1L6A6NFF2 107 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 TSPAN4O14817 238 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 RBMS2Q15434 407 aaKnown RBP16.61■□□□□ 0.25
CBWD3-212ENST00000616550 MLANAQ16655 118 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 ZNF600Q6ZNG1 722 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 NOXA1Q86UR1 476 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 SLC24A4Q8NFF2 622 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 OR4X1Q8NH49 305 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 ZNF414Q96IQ9 312 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 SPATA25Q9BR10 227 aa16.61■□□□□ 0.25
CBWD3-212ENST00000616550 IGHV7-4-1A0A0J9YVY3 117 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 A0A1B0GU03 582 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 DUXBA0A1W2PPF3 345 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 CLN5O75503 358 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 TNFRSF9Q07011 255 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 CENPSQ8N2Z9 138 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 OR1S1Q8NH92 325 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 RNASEH2CQ8TDP1 164 aaKnown RBP16.6■□□□□ 0.25
CBWD3-212ENST00000616550 GINS3Q9BRX5 216 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 RHPN1-AS1Q9BWJ2 59 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 HSPB7Q9UBY9 170 aa16.6■□□□□ 0.25
CBWD3-212ENST00000616550 RBMY1BA6NDE4 496 aaKnown RBP16.59■□□□□ 0.25
CBWD3-212ENST00000616550 RBMY1EA6NEQ0 496 aaKnown RBP16.59■□□□□ 0.25
CBWD3-212ENST00000616550 CHEK1O14757 476 aa16.59■□□□□ 0.25
CBWD3-212ENST00000616550 SFT2D2O95562 160 aa16.59■□□□□ 0.25
CBWD3-212ENST00000616550 RBMY1DP0C7P1 496 aaKnown RBP16.59■□□□□ 0.25
CBWD3-212ENST00000616550 TOMM20LQ6UXN7 152 aa16.59■□□□□ 0.25
CBWD3-212ENST00000616550 LINC00322Q6ZN03 302 aaPredicted RBP16.59■□□□□ 0.25
CBWD3-212ENST00000616550 PUS1Q9Y606 427 aaKnown RBP eCLIP16.59■□□□□ 0.25
CBWD3-212ENST00000616550 TRAV30A0A087WSZ9 112 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 IGHV3-49A0A0A0MS15 119 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 LINC00854A0A1B0GVQ3 168 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 CENPXA8MT69 81 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 IFNA10P01566 189 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 NPY1RP25929 384 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 PPP1R1AQ13522 171 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 SDHCQ99643 169 aaPredicted RBP16.58■□□□□ 0.24
CBWD3-212ENST00000616550 RBKSQ9H477 322 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 MRPL36Q9P0J6 103 aaKnown RBP16.58■□□□□ 0.24
CBWD3-212ENST00000616550 U3KQ87 197 aa16.58■□□□□ 0.24
CBWD3-212ENST00000616550 SLC25A4P12235 298 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 BMI1P35226 326 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 ETFRF1Q6IPR1 90 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 LRTM2Q8N967 370 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 DTD1Q8TEA8 209 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 RNF2Q99496 336 aa16.57■□□□□ 0.24
CBWD3-212ENST00000616550 OR4C46A6NHA9 309 aa16.56■□□□□ 0.24
CBWD3-212ENST00000616550 UBE2MP61081 183 aaKnown RBP16.56■□□□□ 0.24
CBWD3-212ENST00000616550 IGHV3OR16-13A0A075B7E8 117 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 IGHV3-74A0A0B4J1X5 117 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 NDUFB6O95139 128 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 SLC25A6P12236 298 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 TMEM170AQ8WVE7 144 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 C7orf50Q9BRJ6 194 aaKnown RBP16.55■□□□□ 0.24
CBWD3-212ENST00000616550 ZFAND3Q9H8U3 227 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 UBQLN2Q9UHD9 624 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 TMED3Q9Y3Q3 217 aa16.55■□□□□ 0.24
CBWD3-212ENST00000616550 PITX3O75364 302 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 CD5P06127 495 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 IL7P13232 177 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 NPPCP23582 126 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 RND2P52198 227 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 TIGITQ495A1 244 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 PRSS54Q6PEW0 395 aa16.54■□□□□ 0.24
CBWD3-212ENST00000616550 IGKV1-17P01599 117 aa16.53■□□□□ 0.24
CBWD3-212ENST00000616550 HOXB5P09067 269 aa16.53■□□□□ 0.24
CBWD3-212ENST00000616550 ATP5IP56385 69 aaPredicted RBP16.53■□□□□ 0.24
CBWD3-212ENST00000616550 OR1S2Q8NGQ3 325 aa16.53■□□□□ 0.24
CBWD3-212ENST00000616550 CITED4Q96RK1 184 aa16.53■□□□□ 0.24
CBWD3-212ENST00000616550 IGKV3-7A0A075B6H7 116 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 LOC102724200A0A096LPH7 203 aaPredicted RBP16.52■□□□□ 0.24
CBWD3-212ENST00000616550 IFNA4P05014 189 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 OR10J1P30954 320 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 PAFAH1B2P68402 229 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 ST8SIA2Q92186 375 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 METTL26Q96S19 204 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 GGTLC1Q9BX51 225 aa16.52■□□□□ 0.24
CBWD3-212ENST00000616550 TMEM231Q9H6L2 316 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms