RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 C12orf54Q6X4T0 127 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 PQLC2Q6ZP29 291 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 UBALD1Q8TB05 177 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 SPOCK3Q9BQ16 436 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 SLC35E4Q6ICL7 350 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 C1orf162Q8NEQ5 155 aaPredicted RBP17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 USP9XQ93008 2570 aaPredicted RBP17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 C2orf70A6NJV1 201 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 FNDC10F2Z333 226 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 M0R2Z0 102 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 CELA3BP08861 270 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 IBA57Q5T440 356 aaKnown RBP17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 EBLN2Q6P2I7 272 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 FAM216AQ8WUB2 273 aa17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 RNASE6Q93091 150 aaKnown RBP17.94■□□□□ 0.46
POLR2J3-220ENST00000613744 C12orf77C9JDV5 145 aa17.93■□□□□ 0.46
POLR2J3-220ENST00000613744 CRXO43186 299 aaPredicted RBP17.93■□□□□ 0.46
POLR2J3-220ENST00000613744 OR2J3O76001 311 aa17.93■□□□□ 0.46
POLR2J3-220ENST00000613744 TNXAQ16473 311 aa17.93■□□□□ 0.46
POLR2J3-220ENST00000613744 TEPPQ6URK8 271 aa17.93■□□□□ 0.46
POLR2J3-220ENST00000613744 OR9G9P0C7N8 305 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 Q56UQ5 140 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 MRPL54Q6P161 138 aaKnown RBP17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 STPG3Q8N7X2 389 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 RNASE7Q9H1E1 156 aaKnown RBP17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 HEYLQ9NQ87 328 aaPredicted RBP17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 SPINK4O60575 86 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 HLA-DRB1P01911 266 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 PPOXP50336 477 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR27Q6MZM9 219 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 LINC01560Q8TB33 94 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 TMEM70Q9BUB7 260 aa17.92■□□□□ 0.46
POLR2J3-220ENST00000613744 FBXL19-AS1Q494R0 122 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 BVES-AS1Q5T3Y7 98 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 OR4A47Q6IF82 309 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 FAM71F2Q6NXP2 309 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 OR4A16Q8NH70 328 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 C19orf84I3L1E1 186 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 HBZP02008 142 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 CRYBB3P26998 211 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR20EP86478 221 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR20CP86479 221 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR20DP86480 221 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR20BP86481 221 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 PRR20AP86496 221 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 SPATA31B1PQ5VZV4 182 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 OR52L2PQ8NGH6 319 aa17.91■□□□□ 0.46
POLR2J3-220ENST00000613744 TENM4Q6N022 2769 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 HCFC1P51610 2035 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 CD5LO43866 347 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 IGLV2-8P01709 118 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 PSG1P11464 419 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 SLAQ13239 276 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 TIMM23BQ5SRD1 257 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 FAM231DQ6ZW35 169 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 ZNF596Q8TC21 504 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 C1orf159Q96HA4 380 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 IGF2BP2-AS1Q96M15 143 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 OR2V2Q96R30 315 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 SLC25A15Q9Y619 301 aa17.9■□□□□ 0.46
POLR2J3-220ENST00000613744 LINC00473A8K010 186 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 M0R1X1 148 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 CIDEAO60543 219 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 DUTP33316 252 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 ARF6P62330 175 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 WFDC8Q8IUA0 241 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 CHRDL1Q9BU40 450 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 TNFRSF19Q9NS68 423 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 UTP20O75691 2785 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 FOXH1O75593 365 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 TCL1AP56279 114 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 FXYD3Q14802 87 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 MPV17L2Q567V2 206 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 PRAMEF5Q5TYX0 476 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 PRAMEF6Q5VXH4 476 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 SSMEM1Q8WWF3 244 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 C19orf24Q9BVV8 132 aa17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 TECRQ9NZ01 308 aaKnown RBP17.89■□□□□ 0.45
POLR2J3-220ENST00000613744 J3QW42 95 aa17.88■□□□□ 0.45
POLR2J3-220ENST00000613744 HAND1O96004 215 aa17.88■□□□□ 0.45
POLR2J3-220ENST00000613744 RELBQ01201 579 aa17.88■□□□□ 0.45
POLR2J3-220ENST00000613744 SLC25A34Q6PIV7 304 aa17.88■□□□□ 0.45
POLR2J3-220ENST00000613744 A0A1W2PRE2 83 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 HSBP1L1C9JCN9 74 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 THBDP07204 575 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 TBC1D28Q2M2D7 210 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 MBD6Q96DN6 1003 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 NUDT11Q96G61 164 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 WASHC3Q9Y3C0 194 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 A1L4Q6 167 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 TMEM238C9JI98 176 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 SLC35B1P78383 322 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 PSG5Q15238 335 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 ATP5L2Q7Z4Y8 100 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 RNF24Q9Y225 148 aa17.87■□□□□ 0.45
POLR2J3-220ENST00000613744 OR4C46A6NHA9 309 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 ERVK-16P61578 105 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 WDR86Q86TI4 376 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 NEUROG1Q92886 237 aa17.86■□□□□ 0.45
POLR2J3-220ENST00000613744 GRAMD2BQ96HH9 432 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms